RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 RPTORQ8N122 1335 aa8.25□□□□□ -1.09
NECAP1-204ENST00000540083 H3BQV1 296 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 NKRFO15226 690 aaKnown RBP eCLIP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 EIF3HO15372 352 aaKnown RBP eCLIP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 MEFVO15553 781 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 PPP1R11O60927 126 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 COBLO75128 1261 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 RASSF9O75901 435 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 PGK2P07205 417 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 TGFB3P10600 412 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 ALDH5A1P51649 535 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 CLNS1AP54105 237 aaKnown RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 CHMP4BP1P59074 171 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 CASP8Q14790 479 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 PKN1Q16512 942 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 CRELD2Q6UXH1 353 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 NLRX1Q86UT6 975 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 BLIDQ8IZY5 108 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 DAGLBQ8NCG7 672 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 GIMAP8Q8ND71 665 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 MIPOL1Q8TD10 442 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 NANOS1Q8WY41 292 aaKnown RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 C8orf76Q96K31 380 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 TRMT1Q9NXH9 659 aaKnown RBP8.24□□□□□ -1.09
NECAP1-204ENST00000540083 DACT1Q9NYF0 836 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 MYO1AQ9UBC5 1043 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 FAM184BQ9ULE4 1060 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 GABRQQ9UN88 632 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 PTCH2Q9Y6C5 1203 aa8.24□□□□□ -1.09
NECAP1-204ENST00000540083 BAZ2BQ9UIF8 2168 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 CCDC194A0A1B0GVG4 234 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 hCG_1642624A0A1W2PR95 340 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 TARSL2A2RTX5 802 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 GOLGA8KD6RF30 607 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 IKBKBO14920 756 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 LUC7L3O95232 432 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 IL2RAP01589 272 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 AKR1A1P14550 325 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 PAX7P23759 505 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 CTGFP29279 349 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 GCKP35557 465 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 KRT2P35908 639 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 ZNF76P36508 570 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 LIG3P49916 1009 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 RAB27AP51159 221 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 USP11P51784 963 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 CENPCQ03188 943 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 DNM1Q05193 864 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 SNCBQ16143 134 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 KIAA0753Q2KHM9 967 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 SLC35G1Q2M3R5 365 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 IQSEC1Q6DN90 963 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 FOXR1Q6PIV2 292 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 ZNF513Q8N8E2 541 aaPredicted RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 LRRN4CLQ8ND94 238 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 NPLOC4Q8TAT6 608 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 FAM76AQ8TAV0 307 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 MICAL1Q8TDZ2 1067 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 MORC4Q8TE76 937 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 SCFD2Q8WU76 684 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 FOXD4L4Q8WXT5 416 aaPredicted RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 CCDC47Q96A33 483 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 CHAMP1Q96JM3 812 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 MCOLN1Q9GZU1 580 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 DNAJC25Q9H1X3 360 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 PXMP2Q9NR77 195 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 VPS54Q9P1Q0 977 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 TCEAL9Q9UHQ7 104 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 PCDHA6Q9UN73 950 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 PCDHA8Q9Y5H6 950 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 HRH3Q9Y5N1 445 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 PLXNB2O15031 1838 aa8.23□□□□□ -1.09
NECAP1-204ENST00000540083 ZNFX1Q9P2E3 1918 aaKnown RBP8.23□□□□□ -1.09
NECAP1-204ENST00000540083 POM121CA8CG34 1229 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 MEIS2O14770 477 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 SEPT4O43236 478 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 STX10O60499 249 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 PEX10O60683 326 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 CUTAO60888 179 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 RTN3O95197 1032 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-204ENST00000540083 LARGE1O95461 756 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 CTDNEP1O95476 244 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 MMP1P03956 469 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 INHAP05111 366 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 EPB41P11171 864 aaKnown RBP8.22□□□□□ -1.09
NECAP1-204ENST00000540083 RHOQP17081 205 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 EDNRBP24530 442 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 GJB2P29033 226 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 CNGA1P29973 690 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 SH3BGRP55822 239 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-204ENST00000540083 ROR2Q01974 943 aaKnown RBP8.22□□□□□ -1.09
NECAP1-204ENST00000540083 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 APBA1Q02410 837 aa8.22□□□□□ -1.09
NECAP1-204ENST00000540083 ACTN3Q08043 901 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms