RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 IRAK3Q9Y616 596 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 ASPMQ8IZT6 3477 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 CEP295Q9C0D2 2601 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 GPR182O15218 404 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 GNA11P29992 359 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 CLLU1OSQ5K130 101 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 FOXD4L5Q5VV16 416 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 OTOP3Q7RTS5 596 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 MAML2Q8IZL2 1156 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 FOXD4L4Q8WXT5 416 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 CUL5Q93034 780 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 ACSF2Q96CM8 615 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 KCNJ14Q9UNX9 436 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 GINS2Q9Y248 185 aa14.05□□□□□ -0.16
CLSTN3-208ENST00000538933 SMCO2A6NFE2 343 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 KRT2P35908 639 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 ADCY7P51828 1080 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 TBC1D8BQ0IIM8 1120 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 FAM177A1Q8N128 213 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 LRRC43Q8N309 656 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 FBXO18Q8NFZ0 1043 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 BICD2Q8TD16 824 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 AUTS2Q8WXX7 1259 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 TNPO1Q92973 898 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 HINFPQ9BQA5 517 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 ZBP1Q9H171 429 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 GLT8D2Q9H1C3 349 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 GJB4Q9NTQ9 266 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 IGSF9Q9P2J2 1179 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 FAM208BQ5VWN6 2430 aa14.04□□□□□ -0.16
CLSTN3-208ENST00000538933 SPEGQ15772 3267 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 IGKV6D-21A0A0A0MT36 114 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 NT5C1B-RDH14C9J2C7 533 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 MAFGO15525 162 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 HOXA2O43364 376 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 GPR32O75388 356 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 ATG7O95352 703 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 CFHP08603 1231 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 GLULP15104 373 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 STAT5BP51692 787 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 CRYBB1P53674 252 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 ACTR2P61160 394 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 MTMR1Q13613 665 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 ST3GAL2Q16842 350 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 ODR4Q5SWX8 454 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 GALNT17Q6IS24 598 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 ZC3H14Q6PJT7 736 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 TMEM173Q86WV6 379 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 C1orf210Q8IVY1 113 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 RSAD2Q8WXG1 361 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 AZI2Q9H6S1 392 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 TBC1D17Q9HA65 648 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 JPH1Q9HDC5 661 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 JADE2Q9NQC1 790 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 SLC9A2Q9UBY0 812 aa14.03□□□□□ -0.16
CLSTN3-208ENST00000538933 MIA3Q5JRA6 1907 aa14.02□□□□□ -0.16
CLSTN3-208ENST00000538933 PATJQ8NI35 1801 aa14.02□□□□□ -0.16
CLSTN3-208ENST00000538933 ESYT2A0FGR8 921 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 POTEMA6NI47 508 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 DCNP07585 359 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 ZSCAN22P10073 491 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 BCAR1P56945 870 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 KIZQ2M2Z5 673 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 PHLDB3Q6NSJ2 640 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 POTEGQ6S5H5 508 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 CCDC149Q6ZUS6 474 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 ZNF598Q86UK7 904 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 ECHDC2Q86YB7 292 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 DIS3L2Q8IYB7 885 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 BLIDQ8IZY5 108 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 VPS52Q8N1B4 723 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 SLC44A3Q8N4M1 653 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 OSMRQ99650 979 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 PHF20Q9BVI0 1012 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 PSTPIP2Q9H939 334 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 PCDHA4Q9UN74 947 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 MTMR6Q9Y217 621 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 MYH9P35579 1960 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 WDR81Q562E7 1941 aa14.02□□□□□ -0.17
CLSTN3-208ENST00000538933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 STK25O00506 426 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 CTSAP10619 480 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 TGM1P22735 817 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 SPECC1Q5M775 1068 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 KIAA0319Q5VV43 1072 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 CABP7Q86V35 215 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 REXO1Q8N1G1 1221 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 VN1R3Q9BXE9 311 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 ZMYND12Q9H0C1 365 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 SFXN1Q9H9B4 322 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 RIC8AQ9NPQ8 531 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 KCNH7Q9NS40 1196 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 CA14Q9ULX7 337 aa14.01□□□□□ -0.17
CLSTN3-208ENST00000538933 SIT1Q9Y3P8 196 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms