RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PPARDQ03181 441 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 MOGSQ13724 837 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 DHX34Q14147 1143 aaKnown RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 HLFQ16534 295 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 P3H1Q32P28 736 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ZDHHC24Q6UX98 284 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ANKRD13CQ8N6S4 541 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SERPINB12Q96P63 405 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ERP44Q9BS26 406 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 KIAA1683Q9H0B3 1180 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 DDX47Q9H0S4 455 aaKnown RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CUEDC2Q9H467 287 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 AMACRQ9UHK6 382 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 NENFQ9UMX5 172 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CHKBQ9Y259 395 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SLC12A7Q9Y666 1083 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 TMEM110-MUSTN1A8MSY1 372 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 A8MXQ7 604 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 PSMG1O95456 288 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 EPHB2P29323 1055 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CRABP2P29373 138 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 KRT2P35908 639 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 MTIF2P46199 727 aaKnown RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ADCY1Q08828 1119 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CYLC2Q14093 348 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SEC23AQ15436 765 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 DPY19L2P1Q6NXN4 242 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF530Q6P9A1 599 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 ACAD11Q709F0 780 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 TMEM110Q86TL2 294 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 SCUBE1Q8IWY4 988 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 MYOCDQ8IZQ8 938 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 STAMQ92783 540 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 DHRS1Q96LJ7 313 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
CSDE1-214ENST00000530886 CEP72Q9P209 647 aa8.74□□□□□ -1.01
CSDE1-214ENST00000530886 LAMB2P55268 1798 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TAF1LQ8IZX4 1826 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 HTR3EA5X5Y0 456 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 MCAMP43121 646 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ZAP70P43403 619 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 PDE1BQ01064 536 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 RNASELQ05823 741 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 KCNMA1Q12791 1236 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 SLC29A2Q14542 456 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 CCDC6Q16204 474 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 DDB1Q16531 1140 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 MAN2A1Q16706 1144 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 CCDC174Q6PII3 467 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 RRAGAQ7L523 313 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 VGLL2Q8N8G2 317 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 LRRC59Q96AG4 307 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 DGCR14Q96DF8 476 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 HNRNPABQ99729 332 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ABCF2Q9UG63 623 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 EFR3BQ9Y2G0 817 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TOGARAM1Q9Y4F4 1720 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 MAST2Q6P0Q8 1798 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 COL1A1P02452 1464 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 M0R2N6 131 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 RASGRF2O14827 1237 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TLR2O60603 784 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TCEA3O75764 348 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 NPEPPSP55786 919 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 GEMIN4P57678 1058 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 MYBPC2Q14324 1141 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 RCN1Q15293 331 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 VSIG1Q86XK7 387 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 SAMD3Q8N6K7 520 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 METTL13Q8N6R0 699 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 PIP4K2CQ8TBX8 421 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 RUNDC3BQ96NL0 473 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 LRRC37BQ96QE4 947 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TUBB6Q9BUF5 446 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 HAO1Q9UJM8 370 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 CROTQ9UKG9 612 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ATP6V0A2Q9Y487 856 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ACTL7BQ9Y614 415 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 A0A0A6YYK5 440 aaPredicted RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TMEM120BA0PK00 339 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 DDX3XO00571 662 aaKnown RBP eCLIP8.73□□□□□ -1.016e-27■■■□□ 16.5
CSDE1-214ENST00000530886 RIPK2O43353 540 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ANXA13P27216 316 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 MTTPP55157 894 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 NEXNQ0ZGT2 675 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ZCWPW2Q504Y3 356 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 PDCD4Q53EL6 469 aaKnown RBP8.73□□□□□ -1.01
CSDE1-214ENST00000530886 TTC38Q5R3I4 469 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ANKRD40Q6AI12 368 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ZBED8Q8IZ13 594 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 OLIG1Q8TAK6 271 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 FNDC8Q8TC99 324 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF398Q8TD17 642 aa8.73□□□□□ -1.01
CSDE1-214ENST00000530886 DQX1Q8TE96 717 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms