RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 TAP1Q03518 808 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 NR1H3Q13133 447 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 CUL4AQ13619 759 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TMED2Q15363 201 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 NBPF9Q3BBW0 867 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TCP11X2Q5H9J9 407 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 ALS2CLQ60I27 953 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TRIM72Q6ZMU5 477 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 MB21D2Q8IYB1 491 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 SLC35F6Q8N357 371 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 FBXL13Q8NEE6 735 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 MRPL4Q9BYD3 311 aaKnown RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TMEM260Q9NX78 707 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 PPME1Q9Y570 386 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 C19orf81C9J6K1 198 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 OPHN1O60890 802 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 NDUFB10O96000 172 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 DR1Q01658 176 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 ZNF568Q3ZCX4 644 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 GLE1Q53GS7 698 aaKnown RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TMEM106CQ9BVX2 250 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 TEX12Q9BXU0 123 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 MRPL40Q9NQ50 206 aaKnown RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 SUCLA2Q9P2R7 463 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 PACSIN2Q9UNF0 486 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 ADCY2Q08462 1091 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 VEPH1Q14D04 833 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 NAA35Q5VZE5 725 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 ITPRIPL1Q6GPH6 555 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 RWDD4Q6NW29 188 aaKnown RBP9.04□□□□□ -0.96
CTNND1-225ENST00000530094 RAD54LQ92698 747 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 SPDL1Q96EA4 605 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 CFAP36Q96G28 342 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 PCDHB6Q9Y5E3 794 aa9.04□□□□□ -0.96
CTNND1-225ENST00000530094 CETPP11597 493 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EIF4A3P38919 411 aaKnown RBP9.03□□□□□ -0.96
CTNND1-225ENST00000530094 DYNLT1P63172 113 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PHEXP78562 749 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 RAD51Q06609 339 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 SNX1Q13596 522 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 TTC23LQ6PF05 361 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PADI6Q6TGC4 694 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 SCARA5Q6ZMJ2 495 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 KATNAL1Q9BW62 490 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 BHMT2Q9H2M3 363 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 DDX56Q9NY93 547 aaKnown RBP9.03□□□□□ -0.96
CTNND1-225ENST00000530094 KRT37O76014 449 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 ZFXP17010 805 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EFNA5P52803 228 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 ARL4CP56559 192 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PSMC5P62195 406 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 RESP18Q5W5W9 173 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 TRIM67Q6ZTA4 783 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 TAB3Q8N5C8 712 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-225ENST00000530094 MB21D1Q8N884 522 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PXDNLA1KZ92 1463 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EIF3DO15371 548 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTNND1-225ENST00000530094 MOCS3O95396 460 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PYGBP11216 843 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 RALAP11233 206 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 VSTM4Q8IW00 320 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EIF2AQ9BY44 585 aaKnown RBP9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PLEKHA4Q9H4M7 779 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 SIGLEC1Q9BZZ2 1709 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 GPR75-ASB3A0A0A6YYF3 556 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EXOC1LA0A1B0GW35 172 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 KPNA7A9QM74 516 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 SNX2O60749 519 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PLTPP55058 493 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 RAB42Q8N4Z0 105 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PYROXD1Q8WU10 500 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 FAF2Q96CS3 445 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EPB41L5Q9HCM4 733 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 EHD2Q9NZN4 543 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 PPP1R9AQ9ULJ8 1098 aa9.03□□□□□ -0.96
CTNND1-225ENST00000530094 STXBP3O00186 592 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 AP3B1O00203 1094 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 COBLO75128 1261 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 SLC4A1P02730 911 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 QARSP47897 775 aaKnown RBP9.02□□□□□ -0.96
CTNND1-225ENST00000530094 SREBF2Q12772 1141 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 ART3Q13508 389 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.96
CTNND1-225ENST00000530094 SUN2Q9UH99 717 aa9.02□□□□□ -0.96
CTNND1-225ENST00000530094 GOLGA8MH3BSY2 632 aa9.02□□□□□ -0.97
CTNND1-225ENST00000530094 RASGRF2O14827 1237 aa9.02□□□□□ -0.97
CTNND1-225ENST00000530094 USP11P51784 963 aa9.02□□□□□ -0.97
CTNND1-225ENST00000530094 YWHAHQ04917 246 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-225ENST00000530094 NFIAQ12857 509 aa9.02□□□□□ -0.97
CTNND1-225ENST00000530094 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-225ENST00000530094 LPAR1Q92633 364 aa9.02□□□□□ -0.97
CTNND1-225ENST00000530094 DACT3Q96B18 629 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms