RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 BAIAP3O94812 1187 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 GCNT3O95395 438 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 LDHAP00338 332 aaKnown RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 SRGAP2CP0DJJ0 459 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 CCDC192P0DO97 292 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 LIG1P18858 919 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 GLRA2P23416 452 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 NPTX2P47972 431 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 CLCN3P51790 818 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 NCKAP1LP55160 1127 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 SOX10P56693 466 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 POU5F1Q01860 360 aaKnown RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 COASYQ13057 564 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 PRPF4BQ13523 1007 aaKnown RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 NFKBIBQ15653 356 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 LRRC26Q2I0M4 334 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 ARSHQ5FYA8 562 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 MFSD5Q6N075 450 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 NOTUMQ6P988 496 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 PSRC1Q6PGN9 363 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 FOXR2Q6PJQ5 311 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 ZPBP2Q6X784 338 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 CATSPER4Q7RTX7 472 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 ZNF720Q7Z2F6 126 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 HAUS6Q7Z4H7 955 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 MYOCDQ8IZQ8 938 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 SPATA20Q8TB22 786 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 TRAPPC12Q8WVT3 735 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 DNAJC19Q96DA6 116 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 BICD1Q96G01 975 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 TSPAN18Q96SJ8 248 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 NOC4LQ9BVI4 516 aaKnown RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 TRPV6Q9H1D0 765 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 KIAA1586Q9HCI6 787 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 UBN1Q9NPG3 1134 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 XPNPEP1Q9NQW7 623 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 PRDM5Q9NQX1 630 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-211ENST00000528787 ANO10Q9NW15 660 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 TBC1D7Q9P0N9 293 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 TBX21Q9UL17 535 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 TELO2Q9Y4R8 837 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 CDY2AQ9Y6F7 541 aa8.72□□□□□ -1.01
SSBP3-211ENST00000528787 A0A087WZ62 844 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 DENND3A2RUS2 1198 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 TMEM150BA6NC51 233 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 ACKR2O00590 384 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 HNRNPDLO14979 420 aaKnown RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 ZBTB39O15060 712 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 HOXA2O43364 376 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 GPR32O75388 356 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 TOM1L1O75674 476 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 VTNP04004 478 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 IQCF3P0C7M6 154 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 PTGS1P23219 599 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 LIG4P49917 911 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 TPM4P67936 248 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 GTF2BQ00403 316 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 MDM2Q00987 491 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 LRRC63Q05C16 580 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 RAD51AP2Q09MP3 1159 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 CUL4BQ13620 913 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 CAPSQ13938 189 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 IKBKEQ14164 716 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 MYBPC2Q14324 1141 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 KIZQ2M2Z5 673 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 DCAF4L1Q3SXM0 396 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 MAEAQ7L5Y9 396 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 GUF1Q8N442 669 aaKnown RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 PGBD4Q96DM1 585 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 DHTKD1Q96HY7 919 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 CHAMP1Q96JM3 812 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 TRIM6Q9C030 488 aaPredicted RBP8.71□□□□□ -1.02
SSBP3-211ENST00000528787 ARHGAP28Q9P2N2 729 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 GINS2Q9Y248 185 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 PCDHA5Q9Y5H7 936 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 ZMYM2Q9UBW7 1377 aa8.71□□□□□ -1.02
SSBP3-211ENST00000528787 ABHD14A-ACY1A0A1B0GW23 586 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 PDXKO00764 312 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 SLC16A4O15374 487 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 PIGRP01833 764 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 PRKCBP05771 671 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 STAG3L1P0CL83 205 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
SSBP3-211ENST00000528787 SARSP49591 514 aaKnown RBP8.7□□□□□ -1.02
SSBP3-211ENST00000528787 RGS19P49795 217 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 FPGSQ05932 587 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 MAPK7Q13164 816 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 PNOCQ13519 176 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 STX1AQ16623 288 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 BMT2Q1RMZ1 405 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 TRIM71Q2Q1W2 868 aaKnown RBP8.7□□□□□ -1.02
SSBP3-211ENST00000528787 FBXO47Q5MNV8 452 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 ZNF618Q5T7W0 954 aa8.7□□□□□ -1.02
SSBP3-211ENST00000528787 CAVIN1Q6NZI2 390 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms