RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 GSTO1P78417 241 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 MTA1Q13330 715 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 TMED1Q13445 227 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 TUBB2AQ13885 445 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 RRP1BQ14684 758 aaKnown RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 MVPQ14764 893 aaKnown RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 POU4F3Q15319 338 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 CPSF6Q16630 551 aaKnown RBP eCLIP5.63□□□□□ -1.51
CD44-218ENST00000525469 DNAJC21Q5F1R6 531 aaKnown RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 CCDC158Q5M9N0 1113 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 BEND3Q5T5X7 828 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 RNF43Q68DV7 783 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 ATF7IPQ6VMQ6 1270 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 LBX2Q6XYB7 198 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 CCDC186Q7Z3E2 898 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 TMC7Q7Z402 723 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 FOXP4Q8IVH2 680 aaPredicted RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 WDR63Q8IWG1 891 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 TEX11Q8IYF3 940 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 ABRAQ8N0Z2 381 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 VGLL2Q8N8G2 317 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 SHCBP1Q8NEM2 672 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 ANKS1AQ92625 1134 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 SLC9A7Q96T83 725 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 TUBB2BQ9BVA1 445 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 MOV10L1Q9BXT6 1211 aaKnown RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 SPATC1LQ9H0A9 340 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 MROH8Q9H579 483 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 RAD18Q9NS91 495 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 PCMTD2Q9NV79 361 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 FAM86C1Q9NVL1 165 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 HOXC10Q9NYD6 342 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 FAM184BQ9ULE4 1060 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 MYO6Q9UM54 1294 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 MROH7-TTC4A0A0A0MT08 1334 aa5.63□□□□□ -1.51
CD44-218ENST00000525469 RIF1Q5UIP0 2472 aaKnown RBP5.63□□□□□ -1.51
CD44-218ENST00000525469 USP34Q70CQ2 3546 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 COL11A1P12107 1806 aaPredicted RBP5.62□□□□□ -1.51
CD44-218ENST00000525469 GPR75-ASB3A0A0A6YYF3 556 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 TMEM238LA0A1B0GVL6 79 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 EFCAB8A8MWE9 144 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 F6X3S4 739 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 POLR3GO15318 223 aaPredicted RBP5.62□□□□□ -1.51
CD44-218ENST00000525469 ADAMTS4O75173 837 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 ALDH1L1O75891 902 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 ASGR1P07306 291 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 NBPF7P0C2Y1 421 aaPredicted RBP5.62□□□□□ -1.51
CD44-218ENST00000525469 MCM3P25205 808 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 MAP4P27816 1152 aaKnown RBP5.62□□□□□ -1.51
CD44-218ENST00000525469 CDK7P50613 346 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 MNAT1P51948 309 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 PLCB3Q01970 1234 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 TAP1Q03518 808 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 ADCY2Q08462 1091 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 COG2Q14746 738 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 SPRED3Q2MJR0 410 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 ZKSCAN2Q63HK3 967 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 PAOXQ6QHF9 649 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 SLC4A10Q6U841 1118 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 DTHD1Q6ZMT9 781 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 TADA2BQ86TJ2 420 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 TRIM42Q8IWZ5 723 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 FAM126BQ8IXS8 530 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 PHOSPHO2Q8TCD6 241 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 BICD2Q8TD16 824 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 UBXN4Q92575 508 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 SUCLG2Q96I99 432 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 C12orf42Q96LP6 360 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 MMP19Q99542 508 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 TINF2Q9BSI4 451 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 TRIM6Q9C030 488 aaPredicted RBP5.62□□□□□ -1.51
CD44-218ENST00000525469 RPAP3Q9H6T3 665 aaPredicted RBP5.62□□□□□ -1.51
CD44-218ENST00000525469 ABCB6Q9NP58 842 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 ARFGAP3Q9NP61 516 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 PRKAG3Q9UGI9 489 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 SIP14410 1827 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 PLXNA3P51805 1871 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 KMT2EQ8IZD2 1858 aa5.62□□□□□ -1.51
CD44-218ENST00000525469 ZFHX2Q9C0A1 2572 aaPredicted RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 GOLGA6L10A6NI86 522 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 EIF3CLB5ME19 914 aaKnown RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 SIPA1L1O43166 1804 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 TREHO43280 583 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 DUSP11O75319 330 aaKnown RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 TIAF1O95411 115 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 SLC25A27O95847 323 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 GH2P01242 217 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 CD4P01730 458 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 HLA-DOAP06340 250 aa5.61□□□□□ -1.51
CD44-218ENST00000525469 PNMA6AP0CW24 399 aaPredicted RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 GCFC2P16383 781 aaKnown RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 ZNF16P17020 682 aaPredicted RBP5.61□□□□□ -1.51
CD44-218ENST00000525469 TAL1P17542 331 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms