RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 COL9A2Q14055 689 aaPredicted RBP8.11□□□□□ -1.11
CASP4-205ENST00000525116 LRRFIP1Q32MZ4 808 aaKnown RBP8.11□□□□□ -1.11
CASP4-205ENST00000525116 RRP12Q5JTH9 1297 aaKnown RBP8.11□□□□□ -1.11
CASP4-205ENST00000525116 TMEM31Q5JXX7 168 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 SYDE2Q5VT97 1194 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 SCARA3Q6AZY7 606 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 RNF207Q6ZRF8 634 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 MAP4K3Q8IVH8 894 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 PHOSPHO2Q8TCD6 241 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 DCAF4Q8WV16 495 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 BTBD6Q96KE9 485 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 RANBP17Q9H2T7 1088 aaKnown RBP8.11□□□□□ -1.11
CASP4-205ENST00000525116 TOMM22Q9NS69 142 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 MTUS1Q9ULD2 1270 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
CASP4-205ENST00000525116 NCOR1O75376 2440 aa8.11□□□□□ -1.11
CASP4-205ENST00000525116 PRRC2BQ5JSZ5 2229 aaKnown RBP8.1□□□□□ -1.11
CASP4-205ENST00000525116 LCTP09848 1927 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
CASP4-205ENST00000525116 TXNP10599 105 aaKnown RBP8.1□□□□□ -1.11
CASP4-205ENST00000525116 BMP6P22004 513 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 BFSP2Q13515 415 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 PPP2R5BQ15173 497 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 PTGISQ16647 500 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 NFRKBQ6P4R8 1299 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 TXNDC11Q6PKC3 985 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 C1orf229Q6ZS94 237 aaPredicted RBP8.1□□□□□ -1.11
CASP4-205ENST00000525116 CHST3Q7LGC8 479 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
CASP4-205ENST00000525116 GDPD5Q8WTR4 605 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 CLEC4DQ8WXI8 215 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 EAF1Q96JC9 268 aaPredicted RBP8.1□□□□□ -1.11
CASP4-205ENST00000525116 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
CASP4-205ENST00000525116 RAD50Q92878 1312 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 FSCN2O14926 492 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 GREM1O60565 184 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 KPNA6O60684 536 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 LPXNO60711 386 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 SSBP05455 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
CASP4-205ENST00000525116 GARTP22102 1010 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
CASP4-205ENST00000525116 RPS6P62753 249 aaKnown RBP8.09□□□□□ -1.11
CASP4-205ENST00000525116 DEFB103AP81534 67 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 PTPN11Q06124 597 aaPredicted RBP8.09□□□□□ -1.11
CASP4-205ENST00000525116 HP1BP3Q5SSJ5 553 aaPredicted RBP8.09□□□□□ -1.11
CASP4-205ENST00000525116 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 SCFD2Q8WU76 684 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 NKD1Q969G9 470 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 CRBNQ96SW2 442 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
CASP4-205ENST00000525116 TMEM47Q9BQJ4 181 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 CD320Q9NPF0 282 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 RCAN3Q9UKA8 241 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 STRIP2Q9ULQ0 834 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 PCDHB5Q9Y5E4 795 aa8.09□□□□□ -1.11
CASP4-205ENST00000525116 NKRFO15226 690 aaKnown RBP eCLIP8.08□□□□□ -1.12
CASP4-205ENST00000525116 FOXP2O15409 715 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
CASP4-205ENST00000525116 BAIAP3O94812 1187 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 ARIH2O95376 493 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 FGRP09769 529 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 TOP1P11387 765 aaKnown RBP8.08□□□□□ -1.12
CASP4-205ENST00000525116 SELPP16109 830 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 NASPP49321 788 aaPredicted RBP8.08□□□□□ -1.12
CASP4-205ENST00000525116 SEPT6Q14141 434 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 GPNMBQ14956 572 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 LY6KQ17RY6 165 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 TCTN1Q2MV58 587 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 USH1GQ495M9 461 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 SEPT14Q6ZU15 432 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 LRRC8DQ7L1W4 858 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 PI4K2BQ8TCG2 481 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 STK35Q8TDR2 534 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 AFAP1L1Q8TED9 768 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 DHX38Q92620 1227 aaKnown RBP8.08□□□□□ -1.12
CASP4-205ENST00000525116 KCNB2Q92953 911 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 UIMC1Q96RL1 719 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 ALG1Q9BT22 464 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 CPVLQ9H3G5 476 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 SUGCTQ9HAC7 445 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 ENAMQ9NRM1 1142 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 EFR3BQ9Y2G0 817 aa8.08□□□□□ -1.12
CASP4-205ENST00000525116 TTC41PQ6P2S7 1318 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 LOC102724159A0A0B4J2E5 919 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 B4DLN1 442 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 SHISA8B8ZZ34 492 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 PI4K2BG5E9Z4 385 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 ORC4O43929 436 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 NBNO60934 754 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 F13A1P00488 732 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 CELA2BP08218 269 aaPredicted RBP8.07□□□□□ -1.12
CASP4-205ENST00000525116 GOLGA8HP0CJ92 632 aa8.07□□□□□ -1.12
CASP4-205ENST00000525116 KCNA5P22460 613 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms