RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 NCK2O43639 380 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 U2AF2P26368 475 aaKnown RBP eCLIP20.82■□□□□ 0.92
SPIDR-220ENST00000522900 NRIP1P48552 1158 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 TOB1P50616 345 aaPredicted RBP20.82■□□□□ 0.92
SPIDR-220ENST00000522900 GNL2Q13823 731 aaKnown RBP20.82■□□□□ 0.92
SPIDR-220ENST00000522900 CLUL1Q15846 466 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 LRRC43Q8N309 656 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 FAM105AQ9NUU6 356 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 PER2O15055 1255 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 ST18O60284 1047 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 TBX10O75333 385 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 DGAT1O75907 488 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 ARL2P36404 184 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 UBE3AQ05086 875 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 CSPP1Q1MSJ5 1256 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 UBXN11Q5T124 520 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 FAM178BQ8IXR5 827 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 KHSRPQ92945 711 aaKnown RBP eCLIP20.81■□□□□ 0.927e-14■■■■□ 21.1
SPIDR-220ENST00000522900 ZNF558Q96NG5 402 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 TUFT1Q9NNX1 390 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 TLR9Q9NR96 1032 aa20.81■□□□□ 0.92
SPIDR-220ENST00000522900 MUC3AQ02505 3323 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 BRWD1Q9NSI6 2320 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 NT5C1B-RDH14C9J2C7 533 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 FSCN2O14926 492 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 ZNF623O75123 536 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 SKIP12755 728 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 XRCC6P12956 609 aaKnown RBP eCLIP20.8■□□□□ 0.92
SPIDR-220ENST00000522900 PTENP60484 403 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 CAPSQ13938 189 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 MXD4Q14582 209 aaPredicted RBP20.8■□□□□ 0.92
SPIDR-220ENST00000522900 MAEAQ7L5Y9 396 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 MRPS27Q92552 414 aaKnown RBP20.8■□□□□ 0.92
SPIDR-220ENST00000522900 POLR3CQ9BUI4 534 aaPredicted RBP20.8■□□□□ 0.92
SPIDR-220ENST00000522900 PCDHB6Q9Y5E3 794 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 PCDHB2Q9Y5E7 798 aa20.8■□□□□ 0.92
SPIDR-220ENST00000522900 USO1O60763 962 aaKnown RBP20.79■□□□□ 0.92
SPIDR-220ENST00000522900 OFD1O75665 1012 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 GLRA2P23416 452 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 TRAPPC10P48553 1259 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 AFF1P51825 1210 aaKnown RBP20.79■□□□□ 0.92
SPIDR-220ENST00000522900 RBM10P98175 930 aaKnown RBP20.79■□□□□ 0.92
SPIDR-220ENST00000522900 ORC2Q13416 577 aaPredicted RBP20.79■□□□□ 0.92
SPIDR-220ENST00000522900 PUS10Q3MIT2 529 aaKnown RBP20.79■□□□□ 0.92
SPIDR-220ENST00000522900 POTEGQ6S5H5 508 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 AGMOQ6ZNB7 445 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 EFHBQ8N7U6 833 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 TBC1D32Q96NH3 1257 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 TLE6Q9H808 572 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 GPRC5CQ9NQ84 441 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 SPG21Q9NZD8 308 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 CLEC1BQ9P126 229 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 NOL7Q9UMY1 257 aaKnown RBP20.79■□□□□ 0.92
SPIDR-220ENST00000522900 INPP5FQ9Y2H2 1132 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 PLXNA4Q9HCM2 1894 aa20.79■□□□□ 0.92
SPIDR-220ENST00000522900 GLP2RO95838 553 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 RPA1P27694 616 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 BCAR1P56945 870 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 ECM1Q16610 540 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 NOMO2Q5JPE7 1267 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 MRPL10Q7Z7H8 261 aaKnown RBP20.78■□□□□ 0.92
SPIDR-220ENST00000522900 IFNLR1Q8IU57 520 aaPredicted RBP20.78■□□□□ 0.92
SPIDR-220ENST00000522900 SLC39A11Q8N1S5 342 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 PPP2R3CQ969Q6 453 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 CPB2Q96IY4 423 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 CCDC43Q96MW1 224 aaKnown RBP20.78■□□□□ 0.92
SPIDR-220ENST00000522900 POLR3FQ9H1D9 316 aaPredicted RBP20.78■□□□□ 0.92
SPIDR-220ENST00000522900 UPF2Q9HAU5 1272 aaKnown RBP20.78■□□□□ 0.92
SPIDR-220ENST00000522900 LZTS1Q9Y250 596 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 BDP1A6H8Y1 2624 aa20.78■□□□□ 0.92
SPIDR-220ENST00000522900 INO80B-WBP1J3KQ70 363 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 B4GALT3O60512 393 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 TSPAN1O60635 241 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 NDUFV1P49821 464 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 RAB27AP51159 221 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 MBTD1Q05BQ5 628 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 POU5F1BQ06416 359 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 PTGDRQ13258 359 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 TFDP1Q14186 410 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 AMHR2Q16671 573 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 PLPP4Q5VZY2 271 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 GLB1LQ6UWU2 654 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 PGBD4Q96DM1 585 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 MSLNLQ96KJ4 702 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 NACC1Q96RE7 527 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 TCF25Q9BQ70 676 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 EIF2AQ9BY44 585 aaKnown RBP20.77■□□□□ 0.92
SPIDR-220ENST00000522900 MRPL9Q9BYD2 267 aaKnown RBP20.77■□□□□ 0.92
SPIDR-220ENST00000522900 EPHX3Q9H6B9 360 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 NRDE2Q9H7Z3 1164 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 TBC1D13Q9NVG8 400 aa20.77■□□□□ 0.92
SPIDR-220ENST00000522900 PUF60Q9UHX1 559 aaKnown RBP20.77■□□□□ 0.92
SPIDR-220ENST00000522900 DBR1Q9UK59 544 aaKnown RBP20.77■□□□□ 0.92
SPIDR-220ENST00000522900 HIDE1A8MVS5 230 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 MBTPS2O43462 519 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 ZC3H11AO75152 810 aaKnown RBP eCLIP20.76■□□□□ 0.91
SPIDR-220ENST00000522900 ERLIN2O94905 339 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 GJB2P29033 226 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms