RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 CBWD1Q9BRT8 395 aa9.17□□□□□ -0.94
CTNNA1-210ENST00000518825 TRIM31Q9BZY9 425 aa9.17□□□□□ -0.94
CTNNA1-210ENST00000518825 QTRT2Q9H974 415 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-210ENST00000518825 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
CTNNA1-210ENST00000518825 PCDHA3Q9Y5H8 950 aa9.17□□□□□ -0.94
CTNNA1-210ENST00000518825 COL2A1P02458 1487 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 COL4A5P29400 1685 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 CLRN2A0PK11 232 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 SHBGP04278 402 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 CHRNB2P17787 502 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 MYL7Q01449 175 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 PPP2R5AQ15172 486 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 TTC31Q49AM3 519 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 KCNV1Q6PIU1 500 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 ZDHHC24Q6UX98 284 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 KRT27Q7Z3Y8 459 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 VPS36Q86VN1 386 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 SYCE1Q8N0S2 351 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 MICALL1Q8N3F8 863 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 LMBR1Q8WVP7 490 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 WDR11Q9BZH6 1224 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 SEL1LQ9UBV2 794 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 ODF2LQ9ULJ1 636 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 ZNF536O15090 1300 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 TCRBV7S2A1N4TA0A589 114 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 BACH1O14867 736 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 TTC27Q6P3X3 843 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 C6orf89Q6UWU4 347 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 ELMO3Q96BJ8 720 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 AGBL1Q96MI9 1066 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 AGPAT1Q99943 283 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 CENPHQ9H3R5 247 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 UBE4BO95155 1302 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 EMSYQ7Z589 1322 aa9.16□□□□□ -0.94
CTNNA1-210ENST00000518825 ANKRD62A6NC57 917 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 PPFIA2O75334 1257 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 MYZAPP0CAP1 466 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 PTGIRP43119 386 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 BYSLQ13895 437 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 EPC2Q52LR7 807 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 ZNF746Q6NUN9 644 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 IPO4Q8TEX9 1081 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 UBLCP1Q8WVY7 318 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 C18orf8Q96DM3 657 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 UBE2TQ9NPD8 197 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.942e-7■■■■■ 172.4
CTNNA1-210ENST00000518825 PKD2L1Q9P0L9 805 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 ZBTB21Q9ULJ3 1066 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 FRMD4BQ9Y2L6 1034 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 ALG6Q9Y672 507 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 ZNFX1Q9P2E3 1918 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 EXOC3O60645 756 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 PEX5P50542 639 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 CTNNBL1Q8WYA6 563 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 CARD9Q9H257 536 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 PPANQ9NQ55 473 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 KCNH7Q9NS40 1196 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 GRHL1Q9NZI5 618 aa9.15□□□□□ -0.94
CTNNA1-210ENST00000518825 SPDYE2BA6NHP3 402 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 A6NNZ2 444 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 SGPL1O95470 568 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 FAM107AO95990 144 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 FTLP02792 175 aaPredicted RBP9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 SPDYE6P0CI01 402 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 GCLMP48507 274 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 DGKZQ13574 1117 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 UGCGQ16739 394 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 TUBB8Q3ZCM7 444 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 PADI6Q6TGC4 694 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 HS2ST1Q7LGA3 356 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 PRELID2Q8N945 189 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 CD101Q93033 1021 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 LRRC45Q96CN5 670 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 MXRA8Q9BRK3 442 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 KCND2Q9NZV8 630 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 NOCTQ9UK39 431 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 ATXN2Q99700 1313 aaKnown RBP9.15□□□□□ -0.95
CTNNA1-210ENST00000518825 NFIBO00712 420 aa9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 KIAA0391O15091 583 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 MEFVO15553 781 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 ERLIN2O94905 339 aa9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 TNFAIP3P21580 790 aa9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 MUTP22033 750 aa9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 INPP5BP32019 993 aa9.14□□□□□ -0.95
CTNNA1-210ENST00000518825 HSD17B4P51659 736 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms