RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 FSIP1Q8NA03 581 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 MCPH1Q8NEM0 835 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 DNAJB3Q8WWF6 145 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 LARP4BQ92615 738 aaKnown RBP22.35■■□□□ 1.17
USP53-208ENST00000514305 PNMA5Q96PV4 448 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 MAP7D2Q96T17 732 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 BHMT2Q9H2M3 363 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 KCNG1Q9UIX4 513 aa22.35■■□□□ 1.17
USP53-208ENST00000514305 LOXHD1Q8IVV2 1947 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 NCOR1O75376 2440 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 E9PMD0 336 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 M0QZ92 97 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 MAFO75444 373 aaPredicted RBP22.34■■□□□ 1.17
USP53-208ENST00000514305 SSBP05455 408 aaKnown RBP eCLIP22.34■■□□□ 1.17
USP53-208ENST00000514305 PLA2G4BP0C869 781 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 SYKP43405 635 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 UBE2HP62256 183 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 ECM1Q16610 540 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 PTPROQ16827 1216 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 PLA2G4FQ68DD2 849 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 USP49Q70CQ1 688 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 METTL13Q8N6R0 699 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 PDILTQ8N807 584 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 SYT2Q8N9I0 419 aaPredicted RBP22.34■■□□□ 1.17
USP53-208ENST00000514305 PLIN2Q99541 437 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 MTRQ99707 1265 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 ATP6V0A4Q9HBG4 840 aa22.34■■□□□ 1.17
USP53-208ENST00000514305 POLR2DO15514 142 aaKnown RBP22.33■■□□□ 1.17
USP53-208ENST00000514305 NPEPPSP55786 919 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 MGAT3Q09327 533 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 LPIN1Q14693 890 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 EPC2Q52LR7 807 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 MARCH8Q5T0T0 291 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 IER5Q5VY09 327 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 EFCAB12Q6NXP0 572 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 RAD54LQ92698 747 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 PANK2Q9BZ23 570 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 FAM49AQ9H0Q0 323 aaPredicted RBP22.33■■□□□ 1.17
USP53-208ENST00000514305 CDY2AQ9Y6F7 541 aa22.33■■□□□ 1.17
USP53-208ENST00000514305 FAM237AA0A1B0GTK4 181 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 A0A1B0GVL5 298 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 ASAP2O43150 1006 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 PRPF40AO75400 957 aaKnown RBP22.32■■□□□ 1.16
USP53-208ENST00000514305 PFKFB1P16118 471 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 PTMSP20962 102 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 MRPS6P82932 125 aaKnown RBP22.32■■□□□ 1.16
USP53-208ENST00000514305 FBXO47Q5MNV8 452 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 KANK3Q6NY19 840 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 PADI6Q6TGC4 694 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 TSHZ1Q6ZSZ6 1077 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 DHX58Q96C10 678 aa22.32■■□□□ 1.16
USP53-208ENST00000514305 NECAB3Q96P71 396 aaPredicted RBP22.32■■□□□ 1.16
USP53-208ENST00000514305 DHX33Q9H6R0 707 aaKnown RBP22.32■■□□□ 1.16
USP53-208ENST00000514305 HOOK1Q9UJC3 728 aaKnown RBP22.32■■□□□ 1.16
USP53-208ENST00000514305 TCHHQ07283 1943 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 ZBTB39O15060 712 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 C22orf31O95567 290 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 KRT18P05783 430 aaKnown RBP22.31■■□□□ 1.16
USP53-208ENST00000514305 CYP11B2P19099 503 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 TPRNQ4KMQ1 711 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 TMEM192Q8IY95 271 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 FIBCD1Q8N539 461 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 TRAPPC12Q8WVT3 735 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 MRPL38Q96DV4 380 aaKnown RBP22.31■■□□□ 1.16
USP53-208ENST00000514305 TNMDQ9H2S6 317 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 HPSEQ9Y251 543 aa22.31■■□□□ 1.16
USP53-208ENST00000514305 IGKV6-21A0A0C4DH24 114 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 USO1O60763 962 aaKnown RBP22.3■■□□□ 1.16
USP53-208ENST00000514305 PSEN1P49768 467 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 GPM6BQ13491 265 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 MXD4Q14582 209 aaPredicted RBP22.3■■□□□ 1.16
USP53-208ENST00000514305 EMC2Q15006 297 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 PSPC1Q8WXF1 523 aaKnown RBP22.3■■□□□ 1.16
USP53-208ENST00000514305 KIFAP3Q92845 792 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 AKT3Q9Y243 479 aa22.3■■□□□ 1.16
USP53-208ENST00000514305 TMEM150BA6NC51 233 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 H3BNC9 293 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 SLC12A3P55017 1021 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 TIGD5Q53EQ6 642 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 CNNM3Q8NE01 707 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 ZBTB10Q96DT7 871 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 DRC1Q96MC2 740 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 SH2D3AQ9BRG2 576 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 UBE2ZQ9H832 354 aaPredicted RBP22.29■■□□□ 1.16
USP53-208ENST00000514305 BLOC1S4Q9NUP1 217 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 RWDD3Q9Y3V2 267 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 TRPV2Q9Y5S1 764 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 SQORQ9Y6N5 450 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 TTC3P53804 2025 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 ADGRA3Q8IWK6 1321 aa22.29■■□□□ 1.16
USP53-208ENST00000514305 BDP1A6H8Y1 2624 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 A0A087WWV3 80 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 ENPP3O14638 875 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 MYL1P05976 194 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 SLFN14P0C7P3 912 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 GUCY2CP25092 1073 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 CTNNB1P35222 781 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 NDUFA8P51970 172 aa22.28■■□□□ 1.16
USP53-208ENST00000514305 FAM160A1Q05DH4 1040 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms