RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 KCND1Q9NSA2 647 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 DNM3Q9UQ16 869 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 ANKRD6Q9Y2G4 727 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 KDM6BO15054 1643 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 TEX14Q8IWB6 1497 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 DIP2BQ9P265 1576 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 OPHN1O60890 802 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 DTNBO60941 627 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
HTT-210ENST00000512909 MED14OSP0DP75 135 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 POLD1P28340 1107 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 GPR3P46089 330 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 MCL1Q07820 350 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 SSPNQ14714 243 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 CCDC181Q5TID7 509 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 MBNL2Q5VZF2 373 aaKnown RBP5.43□□□□□ -1.54
HTT-210ENST00000512909 KRT40Q6A162 431 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 MCTP2Q6DN12 878 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 PPP4R4Q6NUP7 873 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 BHLHE22Q8NFJ8 381 aaPredicted RBP5.43□□□□□ -1.54
HTT-210ENST00000512909 GFM2Q969S9 779 aaKnown RBP5.43□□□□□ -1.54
HTT-210ENST00000512909 WDR92Q96MX6 357 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 GOLGA2P5Q9HBQ8 144 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 CHPF2Q9P2E5 772 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 DNAI1Q9UI46 699 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 MAGEL2Q9UJ55 1249 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 DENND2AQ9ULE3 1009 aa5.43□□□□□ -1.54
HTT-210ENST00000512909 ZCCHC11Q5TAX3 1644 aaKnown RBP5.43□□□□□ -1.54
HTT-210ENST00000512909 ABCA8O94911 1581 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 FMN1Q68DA7 1419 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 A0A0A6YYJ9 748 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 TRIM75PA6NK02 468 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 TSPAN15O95858 294 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 IL18BPO95998 194 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 PF4V1P10720 104 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 ATF3P18847 181 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 LINC00310P59036 64 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 KIF23Q02241 960 aaPredicted RBP5.42□□□□□ -1.54
HTT-210ENST00000512909 MGAT5Q09328 741 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 UAP1L1Q3KQV9 507 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 ZMAT1Q5H9K5 638 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 MUM1L1Q5H9M0 696 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 PITRM1Q5JRX3 1037 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 GJC2Q5T442 439 aaPredicted RBP5.42□□□□□ -1.54
HTT-210ENST00000512909 BORAQ6PGQ7 559 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 KLHDC10Q6PID8 442 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 UNQ6494/PRO21346Q6UXR6 183 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 KANSL1Q7Z3B3 1105 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 REXO1L1PQ8IX06 675 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 TMEFF1Q8IYR6 380 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 ZSCAN18Q8TBC5 510 aaPredicted RBP5.42□□□□□ -1.54
HTT-210ENST00000512909 JPH3Q8WXH2 748 aaPredicted RBP5.42□□□□□ -1.54
HTT-210ENST00000512909 HSPBAP1Q96EW2 488 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 LCORQ96JN0 433 aaPredicted RBP5.42□□□□□ -1.54
HTT-210ENST00000512909 TOX2Q96NM4 488 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 CARD11Q9BXL7 1154 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 PRSS50Q9UI38 385 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 NOB1Q9ULX3 412 aaKnown RBP5.42□□□□□ -1.54
HTT-210ENST00000512909 CDY2AQ9Y6F7 541 aa5.42□□□□□ -1.54
HTT-210ENST00000512909 KIF13AQ9H1H9 1805 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 CLIP1P30622 1438 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 AKAP10O43572 662 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 PRAMEF4O60810 478 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 KNG1P01042 644 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
HTT-210ENST00000512909 PFKMP08237 780 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 HSPA6P17066 643 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 AGXTP21549 392 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 CYP2C19P33261 490 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 STAT5BP51692 787 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 RRADP55042 308 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 MLLT6P55198 1093 aaPredicted RBP5.41□□□□□ -1.54
HTT-210ENST00000512909 PER3P56645 1201 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 GJA9P57773 515 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 KRT85P78386 507 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 KIAA2012Q0VF49 1180 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 MESP2Q0VG99 397 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 USP10Q14694 798 aaKnown RBP5.41□□□□□ -1.54
HTT-210ENST00000512909 STILQ15468 1287 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 MUM1Q2TAK8 710 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
HTT-210ENST00000512909 OGFOD2Q6N063 350 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 RALYLQ86SE5 291 aaKnown RBP5.41□□□□□ -1.54
HTT-210ENST00000512909 SAPCD2Q86UD0 394 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 MYO1HQ8N1T3 1032 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 AFAP1Q8N556 730 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 TEKT5Q96M29 485 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 UHRF1Q96T88 793 aaPredicted RBP5.41□□□□□ -1.54
HTT-210ENST00000512909 USP40Q9NVE5 1235 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 RCAN3Q9UKA8 241 aa5.41□□□□□ -1.54
HTT-210ENST00000512909 ZNF28P17035 718 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 ETV4P43268 484 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 HNRNPMP52272 730 aaKnown RBP eCLIP5.4□□□□□ -1.54
HTT-210ENST00000512909 ANO4Q32M45 955 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 CCDC157Q569K6 752 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 TMEM240Q5SV17 173 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms