RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ADH1AP07327 375 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 MYBP10242 640 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 NOVA1P51513 510 aaKnown RBP12.35□□□□□ -0.43
SNF8-207ENST00000509995 CCR3P51677 355 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 SRSF5Q13243 272 aaKnown RBP12.35□□□□□ -0.43
SNF8-207ENST00000509995 CCDC6Q16204 474 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 ZNF852Q6ZMS4 543 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 MTSS1LQ765P7 747 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 PLPPR4Q7Z2D5 763 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 IQCA1Q86XH1 822 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 PANK1Q8TE04 598 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 NRDE2Q9H7Z3 1164 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 JPH1Q9HDC5 661 aaPredicted RBP12.35□□□□□ -0.43
SNF8-207ENST00000509995 MRPS17Q9Y2R5 130 aaKnown RBP12.35□□□□□ -0.43
SNF8-207ENST00000509995 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 TOP3BO95985 862 aaKnown RBP12.34□□□□□ -0.43
SNF8-207ENST00000509995 VTNP04004 478 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 ZNF806P0C7X5 589 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 ITGB5P18084 799 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 CNR2P34972 360 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 SLC11A1P49279 550 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 STAT5BP51692 787 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
SNF8-207ENST00000509995 SCNM1Q9BWG6 230 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 NT5C3AQ9H0P0 336 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
SNF8-207ENST00000509995 TBC1D13Q9NVG8 400 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 ZDHHC7Q9NXF8 308 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 DNAJB4Q9UDY4 337 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 CDH7Q9ULB5 785 aa12.34□□□□□ -0.43
SNF8-207ENST00000509995 COL1A2P08123 1366 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 SHISA7A6NL88 538 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 C2CD2LO14523 706 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 GIPC1O14908 333 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 TEX28O15482 410 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 URODP06132 367 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 FSHRP23945 695 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 SLC26A2P50443 739 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 AK2P54819 239 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 MTMR1Q13613 665 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 ZNF687Q8N1G0 1237 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 HDAC7Q8WUI4 952 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 RPS6KC1Q96S38 1066 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 PIGSQ96S52 555 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
SNF8-207ENST00000509995 ZBTB42B2RXF5 422 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 HBP1O60381 514 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 B4GALT3O60512 393 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 FNTBP49356 437 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 ACTR2P61160 394 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 RNASELQ05823 741 aaKnown RBP12.32□□□□□ -0.44
SNF8-207ENST00000509995 SLC35G1Q2M3R5 365 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 ZSCAN10Q96SZ4 725 aaPredicted RBP12.32□□□□□ -0.44
SNF8-207ENST00000509995 KXD1Q9BQD3 176 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 PHF20Q9BVI0 1012 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 ARRDC1-AS1Q9H2J1 176 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 HEBP1Q9NRV9 189 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 MAD2L2Q9UI95 211 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 WDR81Q562E7 1941 aa12.32□□□□□ -0.44
SNF8-207ENST00000509995 MYH9P35579 1960 aaKnown RBP12.32□□□□□ -0.44
SNF8-207ENST00000509995 COL4A2P08572 1712 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 C22orf31O95567 290 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 SOD2P04179 222 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 SPATA31D3P0C874 917 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 EIF4BP23588 611 aaKnown RBP12.31□□□□□ -0.44
SNF8-207ENST00000509995 NT5C2P49902 561 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 SATB1Q01826 763 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 NOMO2Q5JPE7 1267 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 GLB1LQ6UWU2 654 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 SPATA31D4Q6ZUB0 917 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 LONP2Q86WA8 852 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 ADAM32Q8TC27 787 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 FGF13Q92913 245 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 GBP3Q9H0R5 595 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 DACT1Q9NYF0 836 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 NDRG2Q9UN36 371 aaKnown RBP12.31□□□□□ -0.44
SNF8-207ENST00000509995 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 INPP5FQ9Y2H2 1132 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 TICRRQ7Z2Z1 1910 aa12.31□□□□□ -0.44
SNF8-207ENST00000509995 CXCL12P48061 93 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 ZNF484Q5JVG2 852 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 RNF43Q68DV7 783 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 CEP68Q76N32 757 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 CUL5Q93034 780 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 LPPQ93052 612 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
SNF8-207ENST00000509995 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
SNF8-207ENST00000509995 RIOX1Q9H6W3 641 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms