RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TBCKQ8TEA7 893 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 DTNBP1Q96EV8 351 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 TRAPPC9Q96Q05 1148 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 CYP39A1Q9NYL5 469 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 STK38LQ9Y2H1 464 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 CD2APQ9Y5K6 639 aa17.13■□□□□ 0.33
SCLT1-208ENST00000506368 TCP11X1B4DZS4 312 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 CYTH3O43739 400 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 HNRNPCL1O60812 293 aaKnown RBP17.12■□□□□ 0.33
SCLT1-208ENST00000506368 MXRA7P84157 204 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 SETDB1Q15047 1291 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 EXOC3L1Q86VI1 746 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 FITM2Q8N6M3 262 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 PIGOQ8TEQ8 1089 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 PRCCQ92733 491 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-208ENST00000506368 MAGEB18Q96M61 343 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 FGFR1OP2Q9NVK5 253 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 GRHL1Q9NZI5 618 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 CTTNBP2NLQ9P2B4 639 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-208ENST00000506368 SERPINB2P05120 415 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 ALDH3A1P30838 453 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 IFNAR2P48551 515 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 TFAP4Q01664 338 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 LRRC41Q15345 812 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 ANO7Q6IWH7 933 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 DRAXINQ8NBI3 349 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-208ENST00000506368 MORC4Q8TE76 937 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 BICD1Q96G01 975 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 TRIM31Q9BZY9 425 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 LRRC4CQ9HCJ2 640 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 SEC63Q9UGP8 760 aaKnown RBP17.12■□□□□ 0.33
SCLT1-208ENST00000506368 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 ACTL7BQ9Y614 415 aa17.12■□□□□ 0.33
SCLT1-208ENST00000506368 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PCK1P35558 622 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 STAT1P42224 750 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PTGIRP43119 386 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 TCEAL1Q15170 157 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 MTFR1Q15390 333 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 THEMIS2Q5TEJ8 643 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PPP1R21Q6ZMI0 780 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 CTNNBL1Q8WYA6 563 aaPredicted RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 GOLPH3Q9H4A6 298 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PFASO15067 1338 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 MROH7Q68CQ1 1323 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 SLC16A3O15427 465 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 TCEA3O75764 348 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 TTLL1O95922 423 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PON1P27169 355 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 DYNC1I2Q13409 638 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 IRGCQ6NXR0 463 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 UBL4BQ8N7F7 174 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
SCLT1-208ENST00000506368 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 IL17RBQ9NRM6 502 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 SNX24Q9Y343 169 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
SCLT1-208ENST00000506368 TMEM120BA0PK00 339 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 NTSR2O95665 410 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 XRCC5P13010 732 aaKnown RBP17.1■□□□□ 0.33
SCLT1-208ENST00000506368 ALAS1P13196 640 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 CTNNA2P26232 953 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 GALCP54803 685 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 PPARDQ03181 441 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 STRN3Q13033 797 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 ENOX2Q16206 610 aaKnown RBP17.1■□□□□ 0.33
SCLT1-208ENST00000506368 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 INTS8Q75QN2 995 aaKnown RBP17.1■□□□□ 0.33
SCLT1-208ENST00000506368 SDCCAG8Q86SQ7 713 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-208ENST00000506368 RHOT2Q8IXI1 618 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 SLC30A5Q8TAD4 765 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
SCLT1-208ENST00000506368 TEKT4Q8WW24 435 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 ART4Q93070 314 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
SCLT1-208ENST00000506368 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.332e-13■■□□□ 13
SCLT1-208ENST00000506368 GNAT1P11488 350 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 PEX5P50542 639 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 CYP1B1Q16678 543 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 PRR5LQ6MZQ0 368 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 KIF2BQ8N4N8 673 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 PDLIM1O00151 329 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 SNAP23O00161 211 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms