RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 KRT15P19012 456 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 SDSP20132 328 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 GPSM2P81274 684 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 TMPRSS15P98073 1019 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 ARID5AQ03989 594 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 NAA30Q147X3 362 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-204ENST00000504131 RAB12Q6IQ22 244 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 RUFY4Q6ZNE9 571 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 HEATR4Q86WZ0 1026 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 CLVS1Q8IUQ0 354 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-204ENST00000504131 IQUBQ8NA54 791 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 BCL7CQ8WUZ0 217 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-204ENST00000504131 ASZ1Q8WWH4 475 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 PMEPA1Q969W9 287 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 SYTL4Q96C24 671 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-204ENST00000504131 SDCCAG3Q96C92 435 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 SLC39A2Q9NP94 309 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 TAGLN3Q9UI15 199 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 PYCARDQ9ULZ3 195 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 SMAD9O15198 467 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 TNFRSF21O75509 655 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 KLHL18O94889 574 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 KRT1P04264 644 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 VAMP1P23763 118 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 MRPS25P82663 173 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PPARDQ03181 441 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC142Q17RM4 750 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 KRT24Q2M2I5 525 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 INO80DQ53TQ3 878 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF530Q6P9A1 599 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 SLC2A7Q6PXP3 512 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 BEND5Q7L4P6 421 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 GLYCTKQ8IVS8 523 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 AFAP1L2Q8N4X5 818 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 LILRB1Q8NHL6 650 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 RASSF5Q8WWW0 418 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 NAF1Q96HR8 494 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 NUP58Q9BVL2 599 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ROGDIQ9GZN7 287 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC90BQ9GZT6 254 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PRDM11Q9NQV5 511 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PCDHB13Q9Y5F0 798 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ARAP1Q96P48 1450 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC162PA2VCL2 907 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 KRT3P12035 628 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PLCG2P16885 1265 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 MAPK3P27361 379 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PPARGP37231 505 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 CYP26C1Q6V0L0 522 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF229Q9UJW7 825 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 MAGED2Q9UNF1 606 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 SNX13Q9Y5W8 968 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ASXL2Q76L83 1435 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 FOXD2O60548 495 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 CLASP2O75122 1294 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 DLATP10515 647 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ATP6V1B1P15313 513 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 VAV1P15498 845 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 SLC1A1P43005 524 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF165P49910 485 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 POLGP54098 1239 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 RRS1Q15050 365 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 TLR1Q15399 786 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 MTHFD1LQ6UB35 978 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PLPP6Q8IY26 295 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 SGCDQ92629 289 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PPP1R16BQ96T49 567 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 FBRSL1Q9HCM7 1045 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 OLFML3Q9NRN5 406 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 MPP6Q9NZW5 540 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ORC3Q9UBD5 711 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 RABGEF1Q9UJ41 708 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 TRMT6Q9UJA5 497 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 JAG2Q9Y219 1238 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 MRPS7Q9Y2R9 242 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 FANCAO15360 1455 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ADGRL1O94910 1474 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 A0A1W2PRG6 482 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 C2orf74A8MZ97 194 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 SLC27A2O14975 620 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF806P0C7X5 589 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PDCD4Q53EL6 469 aaKnown RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 PPP1R15BQ5SWA1 713 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 TMEM63BQ5T3F8 832 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 LRRC8CQ8TDW0 803 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 THRSPQ92748 146 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 RPRD1AQ96P16 312 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-204ENST00000504131 TBCBQ99426 244 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 CCSER1Q9C0I3 900 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 FADS3Q9Y5Q0 445 aa6.64□□□□□ -1.35
CLCN3-204ENST00000504131 UBAP1LF5GYI3 381 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 KLHL2O95198 593 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ESRRAP11474 423 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CD9P21926 228 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 G0S2P27469 103 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 UBA7P41226 1012 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ATP1A2P50993 1020 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms