RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ACER1Q8TDN7 264 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 COG1Q8WTW3 980 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 UNC45AQ9H3U1 944 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 C1orf112Q9NSG2 853 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 UVRAGQ9P2Y5 699 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 TESPA1A2RU30 521 aaPredicted RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 PODXLO00592 558 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 MAP2K7O14733 419 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 TBXAS1P24557 533 aaPredicted RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 TFDP1Q14186 410 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 BEND6Q5SZJ8 279 aaPredicted RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 SIAH1Q8IUQ4 282 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 GRK7Q8WTQ7 553 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 SLC7A3Q8WY07 619 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 WNT8AQ9H1J5 351 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 RPAP3Q9H6T3 665 aaPredicted RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 ABCB6Q9NP58 842 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 FHOD1Q9Y613 1164 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 LTBP1Q14766 1721 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 TGFB3P10600 412 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 ATP5DP30049 168 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 GPC5P78333 572 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 LMNB2Q03252 620 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 PTK2Q05397 1052 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 DBN1Q16643 649 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 ARSHQ5FYA8 562 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 DAAM2Q86T65 1068 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 ZBTB8OSQ8IWT0 167 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 DEPTORQ8TB45 409 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 SYTL5Q8TDW5 730 aaPredicted RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 PIGOQ8TEQ8 1089 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 LENG9Q96B70 501 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 CEP170P1Q96L14 293 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 RPS6KC1Q96S38 1066 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 BUD13Q9BRD0 619 aaKnown RBP eCLIP8□□□□□ -1.13
PDGFC-203ENST00000502773 C2orf40Q9H1Z8 148 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 GANQ9H2C0 597 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 FAM53CQ9NYF3 392 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 RGL1Q9NZL6 768 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 CNOT7Q9UIV1 285 aaKnown RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 COL4A1P02462 1669 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 IGSF9BQ9UPX0 1349 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 YDJCA8MPS7 323 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 CEP104O60308 925 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 RTN2O75298 545 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 MYBP10242 640 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 GTF2BQ00403 316 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 HLTFQ14527 1009 aaKnown RBP eCLIP8□□□□□ -1.13
PDGFC-203ENST00000502773 MIGA2Q7L4E1 593 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 HOOK3Q86VS8 718 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 SLC35C1Q96A29 364 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 DCPSQ96C86 337 aaKnown RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 RUSC1Q9BVN2 902 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 FUT8Q9BYC5 575 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 MRPL47Q9HD33 250 aaKnown RBP8□□□□□ -1.13
PDGFC-203ENST00000502773 VPS18Q9P253 973 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 NAGPAQ9UK23 515 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 GJA3Q9Y6H8 435 aa8□□□□□ -1.13
PDGFC-203ENST00000502773 PALMO75781 387 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 ECM2O94769 699 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 NR3C2P08235 984 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 OSBPP22059 807 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 ECE1P42892 770 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 MATR3P43243 847 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 LIG4P49917 911 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 GFPT1Q06210 699 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 SLC20A2Q08357 652 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 DHX34Q14147 1143 aaKnown RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CCHCR1Q8TD31 782 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 TMEM39BQ9GZU3 492 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 TMEM8AQ9HCN3 771 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 DMAC2Q9NW81 257 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CTTNBP2NLQ9P2B4 639 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 SLC9A2Q9UBY0 812 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 A0A1W2PRG0 241 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 KCNK3O14649 394 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 HOXC6P09630 235 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 DSG3P32926 999 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 SLC1A1P43005 524 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 KCNMA1Q12791 1236 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 DRAP1Q14919 205 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 NBPF20Q3BBV1 942 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 MEI1Q5TIA1 1274 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 LRIG3Q6UXM1 1119 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 SYDE1Q6ZW31 735 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 ANKRD35Q8N283 1001 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 ZBED3Q96IU2 234 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 PDCD2LQ9BRP1 358 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CARD9Q9H257 536 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 PXMP2Q9NR77 195 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 GOLGA6CA6NDK9 693 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 TTC36A6NLP5 189 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 KRIT1O00522 736 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 ENC1O14682 589 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CLIC2O15247 247 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CAND2O75155 1236 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 GOLGA6DP0CG33 693 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 AARSP49588 968 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 POLGP54098 1239 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms