RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 TRHDEQ9UKU6 1024 aa4.51□□□□□ -1.69
EXOSC3-208ENST00000496910 DSEQ9UL01 958 aa4.51□□□□□ -1.69
EXOSC3-208ENST00000496910 C10orf71Q711Q0 1435 aa4.51□□□□□ -1.69
EXOSC3-208ENST00000496910 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.51□□□□□ -1.69
EXOSC3-208ENST00000496910 ASXL1Q8IXJ9 1541 aa4.51□□□□□ -1.69
EXOSC3-208ENST00000496910 EPG5Q9HCE0 2579 aa4.51□□□□□ -1.69
EXOSC3-208ENST00000496910 ZNF462Q96JM2 2506 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 CEP290O15078 2479 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 A0A1W2PQJ5 194 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 KLRG2A4D1S0 409 aaPredicted RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 FAM90A27PA6NNH2 459 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ZNF891A8MT65 544 aaPredicted RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 KCNK3O14649 394 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 APAF1O14727 1248 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 PIP5K1CO60331 668 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 KPNA6O60684 536 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 LRG1P02750 347 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 C8BP07358 591 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 HSP90AA1P07900 732 aaKnown RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ATF2P15336 505 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ZEB1P37275 1124 aaPredicted RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 SRSF3P84103 164 aaKnown RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 TUSC3Q13454 348 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 STAT4Q14765 748 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 CHRNA2Q15822 529 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 FAM47CQ5HY64 1035 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ANO1Q5XXA6 986 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 KCTD1Q719H9 257 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 MILR1Q7Z6M3 343 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 DDX53Q86TM3 631 aaKnown RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 LDHDQ86WU2 507 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 KIF18BQ86Y91 864 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 TPH2Q8IWU9 490 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 FAM126BQ8IXS8 530 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 PPM1KQ8N3J5 372 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ANKRD42Q8N9B4 389 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 TEX19Q8NA77 164 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 CPA5Q8WXQ8 436 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 AP5M1Q9H0R1 490 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 EPB41L4AQ9HCS5 686 aaPredicted RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 DCP1AQ9NPI6 582 aaPredicted RBP4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 B4GALT6Q9UBX8 382 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ZNF69Q9UC07 566 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 NUDT5Q9UKK9 219 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 PCDHB4Q9Y5E5 795 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 TNRQ92752 1358 aa4.5□□□□□ -1.69
EXOSC3-208ENST00000496910 ARHGAP35Q9NRY4 1499 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CHD6Q8TD26 2715 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CLASP2O75122 1294 aaKnown RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 C4BPAP04003 597 aaKnown RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 NBPF7P0C2Y1 421 aaPredicted RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 MED14OSP0DP75 135 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CPEP16870 476 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 BPIP17213 487 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 MC3RP41968 323 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 HALP42357 657 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 TMEM62Q0P6H9 643 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 PICALMQ13492 652 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 GALEQ14376 348 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CRY1Q16526 586 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CFAP100Q494V2 611 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 ALFQ53S48 1182 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 RNF219Q5W0B1 726 aaPredicted RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CXorf57Q6NSI4 855 aaKnown RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CCDC70Q6NSX1 233 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CCDC174Q6PII3 467 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 HDGFL2Q7Z4V5 671 aaPredicted RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 AMIGO3Q86WK7 504 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CILP2Q8IUL8 1156 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 TMEFF1Q8IYR6 380 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 FAM26EQ8N5C1 309 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 VPS37AQ8NEZ2 397 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 COG1Q8WTW3 980 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 SYT3Q9BQG1 590 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 SGPP1Q9BX95 441 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 CATSPERZQ9NTU4 200 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 PUF60Q9UHX1 559 aaKnown RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 B3GALT1Q9Y5Z6 326 aa4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 RANBP2P49792 3224 aaKnown RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 NKTRP30414 1462 aaKnown RBP4.49□□□□□ -1.69
EXOSC3-208ENST00000496910 RASSF10A6NK89 507 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 KRIT1O00522 736 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 GSTA4O15217 222 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 SEMA7AO75326 666 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 ATP2A2P16615 1042 aaKnown RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 PTPN1P18031 435 aaKnown RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 KRT15P19012 456 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 MCCP23508 829 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 NCKAP1LP55160 1127 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 POU5F1Q01860 360 aaKnown RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 DHCR24Q15392 516 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 ICE2Q659A1 982 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 CPZQ66K79 652 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 OGFOD2Q6N063 350 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 TOGARAM2Q6ZUX3 1019 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 SMAP1Q8IYB5 467 aaPredicted RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 CPXCR1Q8N123 301 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 NXPE1Q8N323 547 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 POU5F2Q8N7G0 328 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms