RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 SFPQP23246 707 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 MARCKSP29966 332 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 LAMTOR4Q0VGL1 99 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 TFDP1Q14186 410 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 ECM1Q16610 540 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 EPC2Q52LR7 807 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 FAM102BQ5T8I3 360 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 IER5LQ5T953 404 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 CATSPER4Q7RTX7 472 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 ZNF410Q86VK4 478 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 RNF149Q8NC42 400 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 RNF169Q8NCN4 708 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 FBXO22Q8NEZ5 403 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 ZNF396Q96N95 335 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 INO80BQ9C086 356 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 BHMT2Q9H2M3 363 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 TMX1Q9H3N1 280 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 ALG13Q9NP73 1137 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 DBR1Q9UK59 544 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 DNM3Q9UQ16 869 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 CFAP54Q96N23 3096 aa11.56□□□□□ -0.56
TRAPPC12-222ENST00000493792 E9PMD0 336 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 H3BNC9 293 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 ASAP2O43150 1006 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 MGEA5O60502 916 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 STAG3L1P0CL83 205 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 ZSCAN22P10073 491 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 MUTP22033 750 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 UBA7P41226 1012 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 PHKA2P46019 1235 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 MXD4Q14582 209 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 STK38Q15208 465 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 HERC4Q5GLZ8 1057 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 BMP8AQ7Z5Y6 402 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 RTN4RL1Q86UN2 441 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 CABP7Q86V35 215 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 MCPH1Q8NEM0 835 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 PRSS33Q8NF86 280 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 LINC01599Q8WXQ3 324 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 CALML4Q96GE6 196 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 GPRC5CQ9NQ84 441 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 PIN4Q9Y237 131 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 PCDHB7Q9Y5E2 793 aa11.55□□□□□ -0.56
TRAPPC12-222ENST00000493792 C5orf42Q9H799 3197 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 MYO7AQ13402 2215 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 LRRIQ4A6NIV6 560 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 INO80B-WBP1J3KQ70 363 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 ERLIN2O94905 339 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 LIG1P18858 919 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 LONP1P36776 959 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 GRIN1Q05586 938 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 DLX2Q07687 328 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 PTPROQ16827 1216 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 SLC24A5Q71RS6 500 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 NPAS4Q8IUM7 802 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 AK8Q96MA6 479 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 SAMD11Q96NU1 681 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 USP28Q96RU2 1077 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 MMTAG2Q9BU76 263 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 NT5C3AQ9H0P0 336 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 POLD4Q9HCU8 107 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 C1orf112Q9NSG2 853 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 TECTAO75443 2155 aa11.54□□□□□ -0.56
TRAPPC12-222ENST00000493792 EYA4O95677 639 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 F13A1P00488 732 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 CYP11B2P19099 503 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 GLRA2P23416 452 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 TCF15Q12870 199 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 GPM6BQ13491 265 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 CAPSQ13938 189 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 PTPAQ15257 358 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 TIGD5Q53EQ6 642 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 SPECC1Q5M775 1068 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 TWF2Q6IBS0 349 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 SRGAP1Q7Z6B7 1085 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 FIBCD1Q8N539 461 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 EDAQ92838 391 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 CSRNP2Q9H175 543 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 IFT122Q9HBG6 1241 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 DACT1Q9NYF0 836 aa11.53□□□□□ -0.56
TRAPPC12-222ENST00000493792 MUTYHQ9UIF7 546 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms