RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TMEM192Q8IY95 271 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 KRI1Q8N9T8 703 aaKnown RBP19.2■□□□□ 0.66
MDC1-206ENST00000489540 LINC00301Q8NCQ3 95 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 FBXO22Q8NEZ5 403 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 RASSF8Q8NHQ8 419 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 FOXD4L4Q8WXT5 416 aaPredicted RBP19.2■□□□□ 0.66
MDC1-206ENST00000489540 CLP1Q92989 425 aaKnown RBP19.2■□□□□ 0.66
MDC1-206ENST00000489540 C17orf80Q9BSJ5 609 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 KCND2Q9NZV8 630 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 MTUS1Q9ULD2 1270 aa19.2■□□□□ 0.66
MDC1-206ENST00000489540 EPOPA6NHQ4 379 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 RFXAPO00287 272 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 ZNF623O75123 536 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 SSBP05455 408 aaKnown RBP eCLIP19.19■□□□□ 0.66
MDC1-206ENST00000489540 RB1P06400 928 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 PLA2G4BP0C869 781 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 POU3F3P20264 500 aaPredicted RBP19.19■□□□□ 0.66
MDC1-206ENST00000489540 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 BMPR1AP36894 532 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 CDCA2Q69YH5 1023 aaPredicted RBP19.19■□□□□ 0.66
MDC1-206ENST00000489540 ZNF598Q86UK7 904 aaKnown RBP19.19■□□□□ 0.66
MDC1-206ENST00000489540 DEPTORQ8TB45 409 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 RSPH1Q8WYR4 309 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 CCDC51Q96ER9 411 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 DRC1Q96MC2 740 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 TMEM117Q9H0C3 514 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 C17orf75Q9HAS0 396 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 FAM105AQ9NUU6 356 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 TFIP11Q9UBB9 837 aaKnown RBP19.19■□□□□ 0.66
MDC1-206ENST00000489540 KCNG1Q9UIX4 513 aa19.19■□□□□ 0.66
MDC1-206ENST00000489540 TBKBP1A7MCY6 615 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 GTPBP6O43824 516 aaPredicted RBP19.18■□□□□ 0.66
MDC1-206ENST00000489540 TSPAN1O60635 241 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 FGFR1P11362 822 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 TXLNAP40222 546 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 SLC12A3P55017 1021 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 NOTUMQ6P988 496 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 ABI1Q8IZP0 508 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 RNF169Q8NCN4 708 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 MAFAQ8NHW3 353 aaPredicted RBP19.18■□□□□ 0.66
MDC1-206ENST00000489540 BSNDQ8WZ55 320 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 PRMT7Q9NVM4 692 aaPredicted RBP19.18■□□□□ 0.66
MDC1-206ENST00000489540 LMCD1Q9NZU5 365 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 CCDC39Q9UFE4 941 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
MDC1-206ENST00000489540 COL4A6Q14031 1691 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 PTPRSQ13332 1948 aa19.18■□□□□ 0.66
MDC1-206ENST00000489540 C5orf67F2Z3F1 127 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 SPTLC2O15270 562 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 HIP1RO75146 1068 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PPP6R2O75170 966 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 YEATS4O95619 227 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 GATMP50440 423 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PKP1Q13835 747 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 KARSQ15046 597 aaKnown RBP19.17■□□□□ 0.66
MDC1-206ENST00000489540 AMHR2Q16671 573 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 FAM187BQ17R55 369 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PAN2Q504Q3 1202 aaKnown RBP19.17■□□□□ 0.66
MDC1-206ENST00000489540 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PGBD4Q96DM1 585 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 EPSTI1Q96J88 318 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 CLIC6Q96NY7 704 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PLVAPQ9BX97 442 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 FZD8Q9H461 694 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 CFAP45Q9UL16 551 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PCDHB2Q9Y5E7 798 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 H3BNC9 293 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 LPXNO60711 386 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 LINC00271P0C7V0 271 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 PLCG1P19174 1290 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 CTNNB1P35222 781 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 DDIT3P35638 169 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 EFNA5P52803 228 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 MAPK6Q16659 721 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 SPECC1Q5M775 1068 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 SYMPKQ92797 1274 aaKnown RBP19.17■□□□□ 0.66
MDC1-206ENST00000489540 CASD1Q96PB1 797 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 POLD4Q9HCU8 107 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 AAASQ9NRG9 546 aa19.17■□□□□ 0.66
MDC1-206ENST00000489540 DAXXQ9UER7 740 aaPredicted RBP19.17■□□□□ 0.66
MDC1-206ENST00000489540 BRD1O95696 1058 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 ATF7P17544 494 aaPredicted RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 ARF4P18085 180 aaPredicted RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 DMP1Q13316 513 aaPredicted RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 GPM6BQ13491 265 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 UBXN11Q5T124 520 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 USP49Q70CQ1 688 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 MRPL10Q7Z7H8 261 aaKnown RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 DAW1Q8N136 415 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 GDPD5Q8WTR4 605 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 RAD54LQ92698 747 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 NTPCRQ9BSD7 190 aaKnown RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 C11orf84Q9BUA3 381 aaPredicted RBP19.16■□□□□ 0.66
MDC1-206ENST00000489540 BLOC1S4Q9NUP1 217 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 RNF19AQ9NV58 838 aa19.16■□□□□ 0.66
MDC1-206ENST00000489540 TYW1Q9NV66 732 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms