RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CAPSQ13938 189 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
BRCA1-218ENST00000489037 IL17AQ16552 155 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 ECM1Q16610 540 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 IFNLR1Q8IU57 520 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-218ENST00000489037 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.83■□□□□ 0.12
BRCA1-218ENST00000489037 ASAP3Q8TDY4 903 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 RSPH1Q8WYR4 309 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 IFT74Q96LB3 600 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 TRAIPQ9BWF2 469 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 C2orf40Q9H1Z8 148 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 MYO7AQ13402 2215 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 CDH23Q9H251 3354 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 SLC26A4O43511 780 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 CSPP1Q1MSJ5 1256 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 KIFAP3Q92845 792 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 P2RX5Q93086 422 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 MRPL38Q96DV4 380 aaKnown RBP15.82■□□□□ 0.12
BRCA1-218ENST00000489037 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 NFKBIZQ9BYH8 718 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 LMAN2LQ9H0V9 348 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 MINDY3Q9H8M7 445 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 GPRC5CQ9NQ84 441 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 FAM105AQ9NUU6 356 aa15.82■□□□□ 0.12
BRCA1-218ENST00000489037 E9PMD0 336 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 SSBP05455 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
BRCA1-218ENST00000489037 LAG3P18627 525 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 LONP1P36776 959 aaKnown RBP15.81■□□□□ 0.12
BRCA1-218ENST00000489037 RESTQ13127 1097 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 NOTUMQ6P988 496 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 CABP7Q86V35 215 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 LRRC43Q8N309 656 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 DEPTORQ8TB45 409 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 CCDC51Q96ER9 411 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 MRPL9Q9BYD2 267 aaKnown RBP15.81■□□□□ 0.12
BRCA1-218ENST00000489037 TYW1Q9NV66 732 aaKnown RBP15.81■□□□□ 0.12
BRCA1-218ENST00000489037 PRMT7Q9NVM4 692 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-218ENST00000489037 MTMR6Q9Y217 621 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 CHD7Q9P2D1 2997 aa15.81■□□□□ 0.12
BRCA1-218ENST00000489037 ZNF623O75123 536 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 NAMPTP43490 491 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 MBTD1Q05BQ5 628 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 TIGD5Q53EQ6 642 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 HYIQ5T013 277 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 GLB1LQ6UWU2 654 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 ZNF598Q86UK7 904 aaKnown RBP15.8■□□□□ 0.12
BRCA1-218ENST00000489037 HACE1Q8IYU2 909 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 HELQQ8TDG4 1101 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 CASD1Q96PB1 797 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
BRCA1-218ENST00000489037 TIPINQ9BVW5 301 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-218ENST00000489037 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 KCNG1Q9UIX4 513 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 PCDHB2Q9Y5E7 798 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 COL6A3P12111 3177 aa15.8■□□□□ 0.12
BRCA1-218ENST00000489037 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 CARNS1A5YM72 827 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 TSPAN1O60635 241 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 MAPK6Q16659 721 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 THNSL1Q8IYQ7 743 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 KLHL23Q8NBE8 558 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 URGCPQ8TCY9 931 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 PPP2R3CQ969Q6 453 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 DRC1Q96MC2 740 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 PLIN2Q99541 437 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 UBN1Q9NPG3 1134 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 COG5Q9UP83 839 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 PLAGL2Q9UPG8 496 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 CLIC4Q9Y696 253 aa15.79■□□□□ 0.12
BRCA1-218ENST00000489037 CNTNAP2Q9UHC6 1331 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 GRM6O15303 877 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 LINC00271P0C7V0 271 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 ITGA4P13612 1032 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 ATF7P17544 494 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 HOXA11P31270 313 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 TXLNAP40222 546 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 EFNA5P52803 228 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 CEBPZQ03701 1054 aaKnown RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 RNASELQ05823 741 aaKnown RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 AAK1Q2M2I8 961 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 LONRF3Q496Y0 759 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 CLLU1OSQ5K130 101 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 RINT1Q6NUQ1 792 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 COLGALT1Q8NBJ5 622 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 ATXN2LQ8WWM7 1075 aaKnown RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 LPPQ93052 612 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 CPB2Q96IY4 423 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 ZNF396Q96N95 335 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 ZNF558Q96NG5 402 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 CSRNP2Q9H175 543 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 NSUN3Q9H649 340 aaKnown RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 ALG13Q9NP73 1137 aaKnown RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 RNF19AQ9NV58 838 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms