RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PBX1P40424 430 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 STAT6P42226 847 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 AFMP43652 599 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 ADKP55263 362 aaKnown RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 FUT2Q10981 343 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 KCNB1Q14721 858 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 PKN1Q16512 942 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 SPECC1Q5M775 1068 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 RRAGBQ5VZM2 374 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 KLHL10Q6JEL2 608 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 RSRC2Q7L4I2 434 aaKnown RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 NLRX1Q86UT6 975 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 HNRNPLLQ8WVV9 542 aaKnown RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 ATP6V0A1Q93050 837 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 AK8Q96MA6 479 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 SLC9A7Q96T83 725 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 NAPGQ99747 312 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 TSPYL1Q9H0U9 437 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 SAMSN1Q9NSI8 373 aaKnown RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 CWC15Q9P013 229 aaKnown RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 CTNND2Q9UQB3 1225 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
COL12A1-208ENST00000486533 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
COL12A1-208ENST00000486533 A0A1W2PQC6 194 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 C17orf102A2RUQ5 167 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PSMA7O14818 248 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 BAIAP3O94812 1187 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PARNO95453 639 aaKnown RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 CA3P07451 260 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 SMIM10L2AP0DMW4 78 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 SMIM10L2BP0DMW5 78 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 IGFBP4P22692 258 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 THPOP40225 353 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PRPHP41219 470 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 NAPAP54920 295 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 KRT83P78385 493 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 CKAP4Q07065 602 aaKnown RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 RBL2Q08999 1139 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PTGDRQ13258 359 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 MAP9Q49MG5 647 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 ZNF618Q5T7W0 954 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 CCDC70Q6NSX1 233 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 TOGARAM2Q6ZUX3 1019 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 TRIM50Q86XT4 487 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 BLIDQ8IZY5 108 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 DAGLBQ8NCG7 672 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 GIMAP8Q8ND71 665 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PPM1EQ8WY54 764 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 TNFRSF25Q93038 417 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 WNT8BQ93098 351 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 CDHR1Q96JP9 859 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 GPR20Q99678 358 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 SENP7Q9BQF6 1050 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 THAP9Q9H5L6 903 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 EHMT1Q9H9B1 1298 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 MUC3AQ02505 3323 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PPP1R3GB7ZBB8 358 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 hCG_1984214I3L0E3 225 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 NBNO60934 754 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 FGFR1OPO95684 399 aaKnown RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 RPN1P04843 607 aaKnown RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 ITGB5P18084 799 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 CYLC1P35663 651 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 AMPD3Q01432 767 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 MTMR1Q13613 665 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 HIC1Q14526 733 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 ZNF174Q15697 407 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 CC2D1AQ6P1N0 951 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 DTHD1Q6ZMT9 781 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 HDXQ7Z353 690 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 SERINC5Q86VE9 423 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 ZNF713Q8N859 430 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-208ENST00000486533 USP38Q8NB14 1042 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PHOSPHO2Q8TCD6 241 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 GPRASP2Q96D09 838 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 HAUS4Q9H6D7 363 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PCDHA6Q9UN73 950 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PCDHA4Q9UN74 947 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 TELO2Q9Y4R8 837 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 PCDHA8Q9Y5H6 950 aa9.92□□□□□ -0.82
COL12A1-208ENST00000486533 KAT6AQ92794 2004 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 CTAGE15A4D2H0 777 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 KCNJ18B7U540 433 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 BHMG1C9JSJ3 638 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-208ENST00000486533 TREHO43280 583 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 TLL1O43897 1013 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 ATP9AO75110 1047 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 CTAGE8P0CG41 777 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 GNAT1P11488 350 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 TCF7P36402 384 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-208ENST00000486533 WDR5P61964 334 aaKnown RBP9.91□□□□□ -0.82
COL12A1-208ENST00000486533 GRIN1Q05586 938 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 ADGRE1Q14246 886 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 KCNJ12Q14500 433 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms