RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SLC7A5Q01650 507 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 GUCY2DQ02846 1103 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 ZNF844Q08AG5 666 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 IFFO1Q0D2I5 559 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 STK4Q13043 487 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 XRCC4Q13426 336 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 MTMR3Q13615 1198 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 SNCBQ16143 134 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM153CQ494X1 144 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC9C1Q4G0N8 1177 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC152Q4G0S7 254 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 ZCWPW2Q504Y3 356 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC178Q5BJE1 867 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 ANKRD20A8PQ5CZ79 823 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM26DQ5JW98 314 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 CEP85LQ5SZL2 805 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 C10orf76Q5T2E6 689 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 RUFY4Q6ZNE9 571 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 TOM1L2Q6ZVM7 507 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 DGKHQ86XP1 1220 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 ZC3H3Q8IXZ2 948 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 USP38Q8NB14 1042 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 RASSF8Q8NHQ8 419 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 SEC14L1Q92503 715 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 LRRC45Q96CN5 670 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 SGSM3Q96HU1 749 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 NSUN5Q96P11 429 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 LZTS2Q9BRK4 669 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 TAF1DQ9H5J8 278 aaPredicted RBP5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 ATP6V0A4Q9HBG4 840 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC40A1Q9NP59 571 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 RIC8AQ9NPQ8 531 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 KLC4Q9NSK0 619 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 TCP11L1Q9NUJ3 509 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 BARHL2Q9NY43 387 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 LRP2BPQ9P2M1 347 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM153AQ9UHL3 310 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 NFU1Q9UMS0 254 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 NENFQ9UMX5 172 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 PCDHA6Q9UN73 950 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 PCDHA8Q9Y5H6 950 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 DDX60LQ5H9U9 1706 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 STRCP1A6NGW2 1772 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 C10orf71Q711Q0 1435 aa5.13□□□□□ -1.59
SMARCC1-206ENST00000485737 COL4A1P02462 1669 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 NHSQ6T4R5 1651 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ITGB4P16144 1822 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ATAD5Q96QE3 1844 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 WNK3Q9BYP7 1800 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 KIF13BQ9NQT8 1826 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GMNCA6NCL1 334 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ZBTB42B2RXF5 422 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC188H7C350 402 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GCOM1H8Y6P7 765 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 hCG_1984214I3L0E3 225 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SMIM22K7EJ46 135 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 RAD51CO43502 376 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC26A4O43511 780 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TLR2O60603 784 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PALMO75781 387 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 NTSR2O95665 410 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GNA14O95837 355 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GSTA1P08263 222 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 MYZAPP0CAP1 466 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 FCER1AP12319 257 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC8A1P32418 973 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 RDXP35241 583 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 HSD17B3P37058 310 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 IGHMBP2P38935 993 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 MATR3P43243 847 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 AFF1P51825 1210 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GPLD1P80108 840 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GFPT1Q06210 699 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CHRNDQ07001 517 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PSMD2Q13200 908 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 BYSLQ13895 437 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 UBE4AQ14139 1066 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SEPT2Q15019 361 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TRIP4Q15650 581 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 GRIK4Q16099 956 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 UAP1Q16222 522 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC18A3Q16572 532 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TXNRD1Q16881 649 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC35G1Q2M3R5 365 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 NBPF9Q3BBW0 867 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TMEM119Q4V9L6 283 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 PARP10Q53GL7 1025 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 SFMBT2Q5VUG0 894 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 KCTD16Q68DU8 428 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TTC19Q6DKK2 380 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TLDC1Q6P9B6 456 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CYB5D1Q6P9G0 228 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC121Q6ZUS5 278 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 RRAGAQ7L523 313 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 DMRTC2Q8IXT2 367 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 FUKQ8N0W3 1084 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ZNF713Q8N859 430 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 TRPM4Q8TD43 1214 aa5.12□□□□□ -1.59
SMARCC1-206ENST00000485737 ACTRT1Q8TDG2 376 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms