RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 IFT122Q9HBG6 1241 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 ENTPD7Q9NQZ7 604 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 AGPAT5Q9NUQ2 364 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 MYO7AQ13402 2215 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDK9-203ENST00000480353 SSTR3P32745 418 aaPredicted RBP17.05■□□□□ 0.32
CDK9-203ENST00000480353 NRIP1P48552 1158 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
CDK9-203ENST00000480353 RARRES1P49788 294 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 HYAL1Q12794 435 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDK9-203ENST00000480353 CLLU1OSQ5K130 101 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 PDE12Q6L8Q7 609 aaKnown RBP17.05■□□□□ 0.32
CDK9-203ENST00000480353 KCNT2Q6UVM3 1135 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 MAEAQ7L5Y9 396 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 RBM23Q86U06 439 aaKnown RBP17.05■□□□□ 0.32
CDK9-203ENST00000480353 TMEM87AQ8NBN3 555 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 TLE6Q9H808 572 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 SPG21Q9NZD8 308 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 STK24Q9Y6E0 443 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 BRWD1Q9NSI6 2320 aa17.05■□□□□ 0.32
CDK9-203ENST00000480353 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 ARHGEF35A5YM69 484 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 CARNS1A5YM72 827 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 SRGAP2BP0DMP2 458 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 DNAJB1P25685 340 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 CCT6AP40227 531 aaKnown RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 CLUL1Q15846 466 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 PLPP4Q5VZY2 271 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 NOTUMQ6P988 496 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 CATSPER3Q86XQ3 398 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 MCPH1Q8NEM0 835 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 MRPS27Q92552 414 aaKnown RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 LPPQ93052 612 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 FAM193BQ96PV7 902 aaPredicted RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 TRAIPQ9BWF2 469 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 POLR3FQ9H1D9 316 aaPredicted RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 SMC3Q9UQE7 1217 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
CDK9-203ENST00000480353 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
CDK9-203ENST00000480353 A0A087WWV3 80 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 ZC3H11AO75152 810 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDK9-203ENST00000480353 GJB2P29033 226 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 AXLP30530 894 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 IRS1P35568 1242 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 POTEGQ6S5H5 508 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 LRRC55Q6ZSA7 311 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 TMC7Q7Z402 723 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 ZBTB8OSQ8IWT0 167 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 HACE1Q8IYU2 909 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 CNNM3Q8NE01 707 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 TMEM169Q96HH4 297 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 TCF25Q9BQ70 676 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 XPNPEP1Q9NQW7 623 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 DBR1Q9UK59 544 aaKnown RBP17.03■□□□□ 0.32
CDK9-203ENST00000480353 LZTS1Q9Y250 596 aa17.03■□□□□ 0.32
CDK9-203ENST00000480353 GRXCR2A6NFK2 248 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 MED24O75448 989 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 IL9P15248 144 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.32
CDK9-203ENST00000480353 U2AF2P26368 475 aaKnown RBP eCLIP17.02■□□□□ 0.321e-7■■□□□ 11.8
CDK9-203ENST00000480353 RPA1P27694 616 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDK9-203ENST00000480353 PBX3P40426 434 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 BCAR1P56945 870 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 PTENP60484 403 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 PLCB3Q01970 1234 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 PTGDRQ13258 359 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 CAMK1Q14012 370 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 NBR1Q14596 966 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 ADGRD2Q7Z7M1 963 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 MINDY3Q9H8M7 445 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 RSAD1Q9HA92 442 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 CD207Q9UJ71 328 aa17.02■□□□□ 0.32
CDK9-203ENST00000480353 CNTNAP2Q9UHC6 1331 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 SPTBN5Q9NRC6 3674 aaKnown RBP17.01■□□□□ 0.31
CDK9-203ENST00000480353 LAD1O00515 517 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 ZNF623O75123 536 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 SPATA31C1P0DKV0 1188 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 ITGA4P13612 1032 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 ARL2P36404 184 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK9-203ENST00000480353 POU5F1BQ06416 359 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 CAPSQ13938 189 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 RILPL1Q5EBL4 403 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 EFHBQ8N7U6 833 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms