RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 BCCIPQ9P287 314 aaKnown RBP eCLIP7.02□□□□□ -1.29
SF3B1-209ENST00000479532 PCDHA4Q9UN74 947 aa7.02□□□□□ -1.29
SF3B1-209ENST00000479532 PTPN22Q9Y2R2 807 aa7.02□□□□□ -1.29
SF3B1-209ENST00000479532 SMCHD1A6NHR9 2005 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 DNAJC25-GNG10A0A024R161 153 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 JAK2O60674 1132 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 MED26O95402 600 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 HMGCRP04035 888 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 PGK2P07205 417 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 CTGFP29279 349 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 CCND2P30279 289 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 GRK4P32298 578 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 KRT2P35908 639 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 GHRHRQ02643 423 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 ZNF792Q3KQV3 632 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 SLC9C1Q4G0N8 1177 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 NAALADL2Q58DX5 795 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 BLIDQ8IZY5 108 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 REXO1Q8N1G1 1221 aaKnown RBP7.01□□□□□ -1.29
SF3B1-209ENST00000479532 CEP120Q8N960 986 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 DAGLBQ8NCG7 672 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 C3orf58Q8NDZ4 430 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 SYTL5Q8TDW5 730 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-209ENST00000479532 MAML3Q96JK9 1138 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 IWS1Q96ST2 819 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 RMDN3Q96TC7 470 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 UBE2OQ9C0C9 1292 aaKnown RBP7.01□□□□□ -1.29
SF3B1-209ENST00000479532 GJD2Q9UKL4 321 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 GABRQQ9UN88 632 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 CNPY2Q9Y2B0 182 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 DOCK3Q8IZD9 2030 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
SF3B1-209ENST00000479532 CCDC194A0A1B0GVG4 234 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 DYNC1I1O14576 645 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 STAM2O75886 525 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 MMP1P03956 469 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 FDPSP14324 419 aaKnown RBP7□□□□□ -1.29
SF3B1-209ENST00000479532 HOXA13P31271 388 aaPredicted RBP7□□□□□ -1.29
SF3B1-209ENST00000479532 ST13P50502 369 aaKnown RBP7□□□□□ -1.29
SF3B1-209ENST00000479532 ALDH5A1P51649 535 aaPredicted RBP7□□□□□ -1.29
SF3B1-209ENST00000479532 GPLD1P80108 840 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 ST3GAL1Q11201 340 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 STXBP2Q15833 593 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 UBE2SQ16763 222 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 GNPTABQ3T906 1256 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 LARP1BQ659C4 914 aaKnown RBP7□□□□□ -1.29
SF3B1-209ENST00000479532 XRRA1Q6P2D8 792 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 USP17L6PQ6QN14 398 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 HFE2Q6ZVN8 426 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 HS2ST1Q7LGA3 356 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 FAM133AQ8N9E0 248 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 NPLOC4Q8TAT6 608 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 USP6NLQ92738 828 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 MEGF10Q96KG7 1140 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 SPACA7Q96KW9 195 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 TCF12Q99081 682 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 NAP1L4Q99733 375 aaKnown RBP7□□□□□ -1.29
SF3B1-209ENST00000479532 TINF2Q9BSI4 451 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 PHF20Q9BVI0 1012 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 TGIF2Q9GZN2 237 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 CCSER2Q9H7U1 834 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 ABCB6Q9NP58 842 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 PXMP2Q9NR77 195 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 DZANK1Q9NVP4 752 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 NRBP1Q9UHY1 535 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 PCDHA6Q9UN73 950 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 PCDHA8Q9Y5H6 950 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 PTCH2Q9Y6C5 1203 aa7□□□□□ -1.29
SF3B1-209ENST00000479532 LCTP09848 1927 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 TMEM238LA0A1B0GVL6 79 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 ZBTB42B2RXF5 422 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 J3QW42 95 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 MEIS2O14770 477 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 OFD1O75665 1012 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 MYCLP12524 364 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-209ENST00000479532 EIF2AK2P19525 551 aaKnown RBP6.99□□□□□ -1.29
SF3B1-209ENST00000479532 AFF1P51825 1210 aaKnown RBP6.99□□□□□ -1.29
SF3B1-209ENST00000479532 CNTN2Q02246 1040 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 NONOQ15233 471 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B1-209ENST00000479532 ZNF394Q53GI3 561 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 JAKMIP3Q5VZ66 844 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 KRT40Q6A162 431 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 MAMDC4Q6UXC1 1216 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 ARMCX2Q7L311 632 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 NLRX1Q86UT6 975 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 CCNJLQ8IV13 435 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 FBXO18Q8NFZ0 1043 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 TBC1D5Q92609 795 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 AIFM3Q96NN9 605 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 HHIPQ96QV1 700 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 TAAR1Q96RJ0 339 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 PDCD2LQ9BRP1 358 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 ANO3Q9BYT9 981 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 ABHD16BQ9H3Z7 469 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 VTA1Q9NP79 307 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 DNAJB12Q9NXW2 375 aaKnown RBP6.99□□□□□ -1.29
SF3B1-209ENST00000479532 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 NOL7Q9UMY1 257 aaKnown RBP6.99□□□□□ -1.29
SF3B1-209ENST00000479532 KCNJ14Q9UNX9 436 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms