RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 FMNL3Q8IVF7 1028 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 TMEFF1Q8IYR6 380 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 STPG3Q8N7X2 389 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 CDYL2Q8N8U2 506 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 AUTS2Q8WXX7 1259 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 NOX5Q96PH1 765 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 SYT3Q9BQG1 590 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 MTG2Q9H4K7 406 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 ZNF277Q9NRM2 450 aaPredicted RBP6.55□□□□□ -1.36
RFC4-212ENST00000479307 ZIM2Q9NZV7 527 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 TMPRSS11EQ9UL52 423 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 LUC7L2Q9Y383 392 aaKnown RBP6.55□□□□□ -1.36
RFC4-212ENST00000479307 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
RFC4-212ENST00000479307 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
RFC4-212ENST00000479307 KIDINS220Q9ULH0 1771 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 A0A0A6YYJ9 748 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 CUTAO60888 179 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 OPHN1O60890 802 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 RFPL1O75677 317 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 VCAM1P19320 739 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 AGXTP21549 392 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 SPIDRQ14159 915 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 RTP5Q14D33 572 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 PCBP2Q15366 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
RFC4-212ENST00000479307 CLUL1Q15846 466 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 ANO4Q32M45 955 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 WDR72Q3MJ13 1102 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 HSP90AB2PQ58FF8 381 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 PRR31Q5SQ13 230 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 CCDC181Q5TID7 509 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 GRAMD4Q6IC98 578 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 CNKSR3Q6P9H4 555 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 STK32CQ86UX6 486 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 RAVER1Q8IY67 606 aaKnown RBP6.54□□□□□ -1.36
RFC4-212ENST00000479307 OR14C36Q8NHC7 312 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 FNIP1Q8TF40 1166 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 HIST1H2AHQ96KK5 128 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 HIST1H2AJQ99878 128 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 HAPLN2Q9GZV7 340 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 KCTD10Q9H3F6 313 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 FTSJ1Q9UET6 329 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 PRSS50Q9UI38 385 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 CROTQ9UKG9 612 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 SYNPO2Q9UMS6 1093 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 INVSQ9Y283 1065 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 PCDHB6Q9Y5E3 794 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 GPR45Q9Y5Y3 372 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 ZMYM3Q14202 1370 aa6.54□□□□□ -1.36
RFC4-212ENST00000479307 MED14O60244 1454 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 CDK12Q9NYV4 1490 aaPredicted RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 TCAF2A6NFQ2 919 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 H0Y858 1186 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 RFXAPO00287 272 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 XPOTO43592 962 aaKnown RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 TSPAN6O43657 245 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 NRP2O60462 931 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 KNG1P01042 644 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 LPLP06858 475 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 U2AF1L5P0DN76 240 aaPredicted RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 U2AF1Q01081 240 aaKnown RBP eCLIP6.53□□□□□ -1.36
RFC4-212ENST00000479307 SRSF2Q01130 221 aaKnown RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 CD83Q01151 205 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 SMAD4Q13485 552 aaKnown RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 DGKDQ16760 1214 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 EFCAB2Q5VUJ9 269 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 TMEM200BQ69YZ2 307 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 SLC41A1Q8IVJ1 513 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 CPA6Q8N4T0 437 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 NUP88Q99567 741 aaPredicted RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 SLC38A3Q99624 504 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 PCGF6Q9BYE7 350 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
RFC4-212ENST00000479307 ZNF180Q9UJW8 692 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 GIT1Q9Y2X7 761 aa6.53□□□□□ -1.36
RFC4-212ENST00000479307 ITSN2Q9NZM3 1697 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 ROBO1Q9Y6N7 1651 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 EP400Q96L91 3159 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 A0A0G2JNJ9 132 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 PCDHGA12O60330 932 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 PCDH8O95206 1070 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 SCGB1D2O95969 90 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 CT47B1P0C2W7 299 aaPredicted RBP6.52□□□□□ -1.37
RFC4-212ENST00000479307 COL6A1P12109 1028 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 ZSCAN20P17040 1043 aaPredicted RBP6.52□□□□□ -1.37
RFC4-212ENST00000479307 XPAP23025 273 aaPredicted RBP6.52□□□□□ -1.37
RFC4-212ENST00000479307 RPL13P26373 211 aaKnown RBP6.52□□□□□ -1.37
RFC4-212ENST00000479307 MUM1Q2TAK8 710 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 PHF19Q5T6S3 580 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 ATG14Q6ZNE5 492 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 SAPCD2Q86UD0 394 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 LYSMD2Q8IV50 215 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 FAM9AQ8IZU1 332 aaPredicted RBP6.52□□□□□ -1.37
RFC4-212ENST00000479307 GAB3Q8WWW8 586 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 RELTQ969Z4 430 aa6.52□□□□□ -1.37
RFC4-212ENST00000479307 PAWRQ96IZ0 340 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms