RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 HS1BP3Q53T59 392 aa31.61■■■□□ 2.65
VEGFA-211ENST00000476772 SPECC1LQ69YQ0 1117 aa31.61■■■□□ 2.65
VEGFA-211ENST00000476772 MTHFD1LQ6UB35 978 aa31.61■■■□□ 2.65
VEGFA-211ENST00000476772 LINC01465Q8N7H1 131 aa31.61■■■□□ 2.65
VEGFA-211ENST00000476772 TSKSQ9UJT2 592 aa31.61■■■□□ 2.65
VEGFA-211ENST00000476772 GJB1P08034 283 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 RARBP10826 455 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 PSEN2P49810 448 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 DNM2P50570 870 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 VWA3BQ502W6 1294 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 RHPN2Q8IUC4 686 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 SLC9A9Q8IVB4 645 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 TRIM59Q8IWR1 403 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 UPF3AQ9H1J1 476 aaKnown RBP31.6■■■□□ 2.65
VEGFA-211ENST00000476772 ANKRD63C9JTQ0 380 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 EPB41P11171 864 aaKnown RBP31.6■■■□□ 2.65
VEGFA-211ENST00000476772 SCP2P22307 547 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 SNRPFP62306 86 aaKnown RBP31.6■■■□□ 2.65
VEGFA-211ENST00000476772 MARCH8Q5T0T0 291 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 FRMD5Q7Z6J6 570 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 C12orf56Q8IXR9 622 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 PPP1R13LQ8WUF5 828 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 CBWD1Q9BRT8 395 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 SETD4Q9NVD3 440 aa31.6■■■□□ 2.65
VEGFA-211ENST00000476772 KAT6AQ92794 2004 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 HAS3O00219 553 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 PGK1P00558 417 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 SMIM10L2AP0DMW4 78 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 SMIM10L2BP0DMW5 78 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 MYBPC2Q14324 1141 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 ARHGEF6Q15052 776 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 RNF149Q8NC42 400 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 PXYLP1Q8TE99 480 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 NDST4Q9H3R1 872 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 PCIF1Q9H4Z3 704 aa31.59■■■□□ 2.65
VEGFA-211ENST00000476772 SRGAP2CP0DJJ0 459 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 PURAQ00577 322 aaKnown RBP31.58■■■□□ 2.65
VEGFA-211ENST00000476772 STRN3Q13033 797 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 MAP3K21Q5TCX8 1036 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 ARMCX5Q6P1M9 558 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 SLC39A4Q6P5W5 647 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 TMEM174Q8WUU8 243 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 LMBR1Q8WVP7 490 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 TMEM134Q9H6X4 195 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 ARMCX3Q9UH62 379 aaPredicted RBP31.58■■■□□ 2.65
VEGFA-211ENST00000476772 PHLPP2Q6ZVD8 1323 aa31.58■■■□□ 2.65
VEGFA-211ENST00000476772 RRN3P2A6NIE6 340 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 K7ERI5 159 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 PSMC2P35998 433 aaKnown RBP31.57■■■□□ 2.65
VEGFA-211ENST00000476772 ARID5BQ14865 1188 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 GNASQ5JWF2 1037 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 CDCA2Q69YH5 1023 aaPredicted RBP31.57■■■□□ 2.65
VEGFA-211ENST00000476772 FAM186BQ8IYM0 893 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 BICD1Q96G01 975 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 ZNF830Q96NB3 372 aaPredicted RBP31.57■■■□□ 2.65
VEGFA-211ENST00000476772 MKNK1Q9BUB5 465 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 SPC25Q9HBM1 224 aa31.57■■■□□ 2.65
VEGFA-211ENST00000476772 HNRNPDLO14979 420 aaKnown RBP31.57■■■□□ 2.64
VEGFA-211ENST00000476772 MAP2K1Q02750 393 aaPredicted RBP31.57■■■□□ 2.64
VEGFA-211ENST00000476772 TBX2Q13207 712 aaPredicted RBP31.57■■■□□ 2.64
VEGFA-211ENST00000476772 NLRP4Q96MN2 994 aa31.57■■■□□ 2.64
VEGFA-211ENST00000476772 KATNAL1Q9BW62 490 aa31.57■■■□□ 2.64
VEGFA-211ENST00000476772 HSPBP1Q9NZL4 362 aa31.57■■■□□ 2.64
VEGFA-211ENST00000476772 FRMD4BQ9Y2L6 1034 aa31.57■■■□□ 2.64
VEGFA-211ENST00000476772 ITIH6Q6UXX5 1313 aa31.56■■■□□ 2.64
VEGFA-211ENST00000476772 EXOC3O60645 756 aa31.56■■■□□ 2.64
VEGFA-211ENST00000476772 HSPA6P17066 643 aa31.56■■■□□ 2.64
VEGFA-211ENST00000476772 ADSSP30520 456 aa31.56■■■□□ 2.64
VEGFA-211ENST00000476772 TFDP1Q14186 410 aa31.56■■■□□ 2.64
VEGFA-211ENST00000476772 ZNF668Q96K58 619 aaPredicted RBP31.56■■■□□ 2.64
VEGFA-211ENST00000476772 METTL14Q9HCE5 456 aaKnown RBP31.56■■■□□ 2.64
VEGFA-211ENST00000476772 XPNPEP3Q9NQH7 507 aa31.56■■■□□ 2.64
VEGFA-211ENST00000476772 UTP18Q9Y5J1 556 aaKnown RBP eCLIP31.56■■■□□ 2.641e-11■□□□□ 9.4
VEGFA-211ENST00000476772 NRCAMQ92823 1304 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 A0A1W2PQC6 194 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 ASAP2O43150 1006 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 ADAMTS4O75173 837 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 TMOD1P28289 359 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 GSDMDP57764 484 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 NKX3-2P78367 333 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 FKBP15Q5T1M5 1219 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 BORCS6Q96GS4 357 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 BEGAINQ9BUH8 593 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 USP20Q9Y2K6 914 aa31.55■■■□□ 2.64
VEGFA-211ENST00000476772 KPNA6O60684 536 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 EDN1P05305 212 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 EFNA5P52803 228 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 ZBTB8OSQ8IWT0 167 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 CCDC113Q9H0I3 377 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 KCNF1Q9H3M0 494 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 AKT3Q9Y243 479 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.54■■■□□ 2.643e-7■□□□□ 8
VEGFA-211ENST00000476772 LIG4P49917 911 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 PRMT2P55345 433 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 NFRKBQ6P4R8 1299 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 XXYLT1Q8NBI6 393 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 ZSWIM2Q8NEG5 633 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 C2orf40Q9H1Z8 148 aa31.54■■■□□ 2.64
VEGFA-211ENST00000476772 PIGRP01833 764 aa31.53■■■□□ 2.64
VEGFA-211ENST00000476772 HIC1Q14526 733 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms