RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PCDHB7Q9Y5E2 793 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 MTCH2Q9Y6C9 303 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 PP2D1A8MPX8 630 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 ASAP2O43150 1006 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 SYT1P21579 422 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 CTNNB1P35222 781 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 FAM189BP81408 668 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 ECM1Q16610 540 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 PAN2Q504Q3 1202 aaKnown RBP16.75■□□□□ 0.27
CALD1-215ENST00000472096 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 RNF149Q8NC42 400 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 ASAP3Q8TDY4 903 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 SNX29Q8TEQ0 813 aa16.75■□□□□ 0.27
CALD1-215ENST00000472096 CLP1Q92989 425 aaKnown RBP16.75■□□□□ 0.27
CALD1-215ENST00000472096 ELAC1Q9H777 363 aaKnown RBP16.75■□□□□ 0.27
CALD1-215ENST00000472096 MRPL42Q9Y6G3 142 aaKnown RBP16.75■□□□□ 0.27
CALD1-215ENST00000472096 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 ARL2P36404 184 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 CAPSQ13938 189 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
CALD1-215ENST00000472096 CATSPER4Q7RTX7 472 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 ECHDC2Q86YB7 292 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 MICALL1Q8N3F8 863 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 POLR3FQ9H1D9 316 aaPredicted RBP16.74■□□□□ 0.27
CALD1-215ENST00000472096 MINDY3Q9H8M7 445 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 AGPAT5Q9NUQ2 364 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 DACT1Q9NYF0 836 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 PIN4Q9Y237 131 aaKnown RBP16.74■□□□□ 0.27
CALD1-215ENST00000472096 RWDD3Q9Y3V2 267 aa16.74■□□□□ 0.27
CALD1-215ENST00000472096 UNC80Q8N2C7 3258 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 ARHGEF35A5YM69 484 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 C5orf67F2Z3F1 127 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 FGFR1P11362 822 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 GLRA2P23416 452 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 PHKA2P46019 1235 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 PTENP60484 403 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 TFDP1Q14186 410 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 CCDC85BQ15834 202 aaPredicted RBP16.73■□□□□ 0.27
CALD1-215ENST00000472096 FAM102BQ5T8I3 360 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 KRT79Q5XKE5 535 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 ARL6IP4Q66PJ3 421 aaKnown RBP16.73■□□□□ 0.27
CALD1-215ENST00000472096 PADI6Q6TGC4 694 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
CALD1-215ENST00000472096 GPRC5CQ9NQ84 441 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 CHST12Q9NRB3 414 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
CALD1-215ENST00000472096 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 MYO7AQ13402 2215 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 BRWD1Q9NSI6 2320 aa16.73■□□□□ 0.27
CALD1-215ENST00000472096 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 VWA3AA6NCI4 1184 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 TBKBP1A7MCY6 615 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 H3BNC9 293 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 ATF7P17544 494 aaPredicted RBP16.72■□□□□ 0.27
CALD1-215ENST00000472096 CDC25AP30304 524 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 BMPR1AP36894 532 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 RESTQ13127 1097 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 GPM6BQ13491 265 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
CALD1-215ENST00000472096 ZNF598Q86UK7 904 aaKnown RBP16.72■□□□□ 0.27
CALD1-215ENST00000472096 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
CALD1-215ENST00000472096 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 KIAA1024Q9UPX6 916 aa16.72■□□□□ 0.27
CALD1-215ENST00000472096 TDRD15B5MCY1 1934 aaKnown RBP16.72■□□□□ 0.27
CALD1-215ENST00000472096 HOXA2O43364 376 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 BMP15O95972 392 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 RB1P06400 928 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 CYP11B2P19099 503 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 MAEAQ7L5Y9 396 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 C11orf84Q9BUA3 381 aaPredicted RBP16.71■□□□□ 0.27
CALD1-215ENST00000472096 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 TMEM117Q9H0C3 514 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 BHMT2Q9H2M3 363 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 SCUBE2Q9NQ36 999 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 MTMR6Q9Y217 621 aa16.71■□□□□ 0.27
CALD1-215ENST00000472096 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 ERLIN2O94905 339 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 MLLT3P42568 568 aaPredicted RBP16.7■□□□□ 0.26
CALD1-215ENST00000472096 RAB27AP51159 221 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 MBTD1Q05BQ5 628 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
CALD1-215ENST00000472096 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
CALD1-215ENST00000472096 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 RNF169Q8NCN4 708 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 BSNDQ8WZ55 320 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 PRDM6Q9NQX0 595 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 FAM105AQ9NUU6 356 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 HCSTQ9UBK5 93 aa16.7■□□□□ 0.26
CALD1-215ENST00000472096 LRRIQ4A6NIV6 560 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 E9PMD0 336 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 TULP1O00294 542 aaPredicted RBP16.69■□□□□ 0.26
CALD1-215ENST00000472096 STX6O43752 255 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms