RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SDC4P31431 198 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 ARL4DP49703 201 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 SF3A3Q12874 501 aaKnown RBP eCLIP12.96□□□□□ -0.336e-9■■■■■ 59.3
NEK1-201ENST00000439128 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 DCP1BQ8IZD4 617 aaKnown RBP12.96□□□□□ -0.33
NEK1-201ENST00000439128 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.33
NEK1-201ENST00000439128 THAP9Q9H5L6 903 aa12.96□□□□□ -0.33
NEK1-201ENST00000439128 CCDC160A6NGH7 325 aa12.96□□□□□ -0.34
NEK1-201ENST00000439128 TMEM132DQ14C87 1099 aa12.96□□□□□ -0.34
NEK1-201ENST00000439128 KRT71Q3SY84 523 aa12.96□□□□□ -0.34
NEK1-201ENST00000439128 JADE1Q6IE81 842 aa12.96□□□□□ -0.34
NEK1-201ENST00000439128 SRGAP2O75044 1071 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 NPTXRO95502 500 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 TTC39CQ8N584 583 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 SH3KBP1Q96B97 665 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 FBXO28Q9NVF7 368 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 RASA1P20936 1047 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 TUFT1Q9NNX1 390 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 EHD2Q9NZN4 543 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 EPN1Q9Y6I3 576 aaPredicted RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 NLRP11P59045 1033 aaKnown RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 ACER1Q8TDN7 264 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 STMN2Q93045 179 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 STK36Q9NRP7 1315 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 LMTK2Q8IWU2 1503 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 SSTR3P32745 418 aaPredicted RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 RPS6P62753 249 aaKnown RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 PTPN21Q16825 1174 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 TTC23LQ6PF05 361 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 TSC1Q92574 1164 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 EXT2Q93063 718 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 MOV10L1Q9BXT6 1211 aaKnown RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 FRMPD1Q5SYB0 1578 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 POC1B-GALNT4F8VUJ3 575 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 RFC5P40937 340 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 PLA2G4FQ68DD2 849 aa12.95□□□□□ -0.34
NEK1-201ENST00000439128 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
NEK1-201ENST00000439128 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 ASAP2O43150 1006 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 FKTNO75072 461 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 NSUN2Q08J23 767 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEK1-201ENST00000439128 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 NDST4Q9H3R1 872 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 TLK1Q9UKI8 766 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 E9PCH4 1651 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PDGFRBP09619 1106 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 SKIP12755 728 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 GNA15P30679 374 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 HOXA7P31268 230 aaPredicted RBP12.94□□□□□ -0.34
NEK1-201ENST00000439128 CDK17Q00537 523 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 CYP4A22Q5TCH4 519 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
NEK1-201ENST00000439128 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 FIS1Q9Y3D6 152 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PIK3R2O00459 728 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PDHBP11177 359 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 AP3M2P53677 418 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 RBP5P82980 135 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
NEK1-201ENST00000439128 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
NEK1-201ENST00000439128 PBXIP1Q96AQ6 731 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 HOXA2O43364 376 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 ZC3H11AO75152 810 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEK1-201ENST00000439128 CYP2C8P10632 490 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 STX2P32856 288 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 RCAN1P53805 252 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PSMC1P62191 440 aaKnown RBP12.94□□□□□ -0.34
NEK1-201ENST00000439128 NFIAQ12857 509 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 PKP1Q13835 747 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 WDR72Q3MJ13 1102 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 FRA10AC1Q70Z53 315 aa12.94□□□□□ -0.34
NEK1-201ENST00000439128 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 DFFAO00273 331 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 NVLO15381 856 aaKnown RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 CD4P01730 458 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 CAPN2P17655 700 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 ORC2Q13416 577 aaPredicted RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 KRT222Q8N1A0 295 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 RUNDC3BQ96NL0 473 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 MXRA8Q9BRK3 442 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 CTNNA1P35221 906 aaKnown RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 SARS2Q9NP81 518 aaKnown RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 XPNPEP3Q9NQH7 507 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 GPC4O75487 556 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms