RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PAPOLBQ9NRJ5 636 aaKnown RBP11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ORC4O43929 436 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 KCNA2P16389 499 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 AP3M2P53677 418 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ZKSCAN8Q15776 578 aaPredicted RBP11.89□□□□□ -0.51
SCN4A-201ENST00000435607 GRAMD1BQ3KR37 738 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ST13P4Q8IZP2 240 aaPredicted RBP11.89□□□□□ -0.51
SCN4A-201ENST00000435607 UCMAQ8WVF2 138 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 PLEKHA8Q96JA3 519 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 PIGSQ96S52 555 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 IPPQ9Y573 584 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 KRT16P08779 473 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 NME3Q13232 169 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 RASGRF1Q13972 1273 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 MAP3K1Q13233 1512 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 CHUKO15111 745 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 SPAG7O75391 227 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 SPARCL1Q14515 664 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 IER5Q5VY09 327 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 BFARQ9NZS9 450 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ALDH1A3P47895 512 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 KLHL38Q2WGJ6 581 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 FAM133AQ8N9E0 248 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ARL8AQ96BM9 186 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ABCB11O95342 1321 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 AATKQ6ZMQ8 1374 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 STAT3P40763 770 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 IL13P35225 146 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 TAP1Q03518 808 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 BRAFP15056 766 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 CDH2P19022 906 aaPredicted RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 PHKA1P46020 1223 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 CENPAP49450 140 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 DR1Q01658 176 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 MXD3Q9BW11 206 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 SYNGAP1Q96PV0 1343 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 WDR91A4D1P6 747 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 BTBD6Q96KE9 485 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 DESI2Q9BSY9 194 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 EPB41L5Q9HCM4 733 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 GPR108Q9NPR9 543 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 MAP3K13O43283 966 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 FAM107AO95990 144 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 CDKL3Q8IVW4 592 aaPredicted RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 UGGT2Q9NYU1 1516 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 PRELPP51888 382 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 NEK2P51955 445 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 MRPL28Q13084 256 aaKnown RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 MFSD4BQ5TF39 518 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 OXCT2Q9BYC2 517 aaPredicted RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 UNC45AQ9H3U1 944 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 TFRCP02786 760 aaKnown RBP11.88□□□□□ -0.51
SCN4A-201ENST00000435607 TRIM72Q6ZMU5 477 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 CCDC90BQ9GZT6 254 aa11.88□□□□□ -0.51
SCN4A-201ENST00000435607 DFFAO00273 331 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 RNASEH1O60930 286 aaKnown RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 MOCS2O96007 188 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 PCDHB7Q9Y5E2 793 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 APOA1P02647 267 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 TAF1CQ15572 869 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 SKA1Q96BD8 255 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 VPS11Q9H270 941 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 KRCC1Q9NPI7 259 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 FANCLQ9NW38 375 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 A8MXQ7 604 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 GH2P01242 217 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 GFAPP14136 432 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ATXN3P54252 364 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 DMC1Q14565 340 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 AKAP7Q9P0M2 348 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ZSCAN26Q16670 478 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 DDIASQ8IXT1 998 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 SIK2Q9H0K1 926 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 MUC3BQ9H195 1237 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 RNF103-CHMP3A0A140T963 221 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 NDUFB5O43674 189 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 VCLP18206 1134 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms