RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ATP6V0A1Q93050 837 aa16.92■□□□□ 0.3
CCDC85A-201ENST00000407595 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
CCDC85A-201ENST00000407595 TRIM7Q9C029 511 aa16.92■□□□□ 0.3
CCDC85A-201ENST00000407595 ELF1P32519 619 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 ZBTB16Q05516 673 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 PDIA5Q14554 519 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 KDM7AQ6ZMT4 941 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 GPRC5CQ9NQ84 441 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 HIP1RO75146 1068 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 SNX1Q13596 522 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 MEA1Q16626 185 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 NUGGCQ68CJ6 796 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 PPP1R18Q6NYC8 613 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 RNF169Q8NCN4 708 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 KAT2BQ92831 832 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 ELMO3Q96BJ8 720 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 BZW2Q9Y6E2 419 aaKnown RBP16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
CCDC85A-201ENST00000407595 COL1A1P02452 1464 aaPredicted RBP16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 SSU72P8A0A1W2PR75 194 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 ACSL3O95573 720 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 SLC9A1P19634 815 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 FAM86B1E9PN63 330 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 FAM86B2P0C5J1 330 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 ZRSR2Q15696 482 aaKnown RBP16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 CHMP6Q96FZ7 201 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 YY1AP1Q9H869 796 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 USP20Q9Y2K6 914 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 A0A1W2PQJ5 194 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 YDJCA8MPS7 323 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 CCDC188H7C350 402 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 DKC1O60832 514 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 CCND2P30279 289 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 QARSP47897 775 aaKnown RBP16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 FAM47CQ5HY64 1035 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 DLK2Q6UY11 383 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 KCNH7Q9NS40 1196 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 C5P01031 1676 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 SCN11AQ9UI33 1791 aa16.9■□□□□ 0.3
CCDC85A-201ENST00000407595 PHLPP1O60346 1717 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 RASGRF2O14827 1237 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 CNGA1P29973 690 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 PSMD2Q13200 908 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 NAALADL2Q58DX5 795 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 THNSL1Q8IYQ7 743 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 KLHL14Q9P2G3 628 aa16.89■□□□□ 0.3
CCDC85A-201ENST00000407595 ZNF233A6NK53 670 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 CD58P19256 250 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 MXI1P50539 228 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 TRIP13Q15645 432 aaPredicted RBP16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 ZNF280CQ8ND82 737 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 RUSC1Q9BVN2 902 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 CHORDC1Q9UHD1 332 aaPredicted RBP16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 DENND3A2RUS2 1198 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 GRID2IPA4D2P6 1211 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 ZNF263O14978 683 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 NT5C2P49902 561 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 SARNPP82979 210 aaKnown RBP16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 CYB5D1Q6P9G0 228 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 GLYCTKQ8IVS8 523 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 KIAA0895Q8NCT3 520 aa16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 TRIM6Q9C030 488 aaPredicted RBP16.89■□□□□ 0.29
CCDC85A-201ENST00000407595 SUN1O94901 812 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 SOX10P56693 466 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 SESN3P58005 492 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 TFAMQ00059 246 aaKnown RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 NAB2Q15742 525 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 ARMC9Q7Z3E5 817 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 CNOT10Q9H9A5 744 aaKnown RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 NXF1Q9UBU9 619 aaKnown RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 SLIT2O94813 1529 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 PRLRP16471 622 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 GAP43P17677 238 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 CYP11B2P19099 503 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 PTK2Q05397 1052 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 GJB7Q6PEY0 223 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 CDR2LQ86X02 465 aaPredicted RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 NSUN6Q8TEA1 469 aaKnown RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 ZNF142P52746 1687 aaPredicted RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 ESYT2A0FGR8 921 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 PEX10O60683 326 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 NR3C2P08235 984 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
CCDC85A-201ENST00000407595 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
CCDC85A-201ENST00000407595 KCNV2Q8TDN2 545 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms