RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF667Q5HYK9 610 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 AP1M1Q9BXS5 423 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 NHEJ1Q9H9Q4 299 aaPredicted RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 TSR3Q9UJK0 312 aaKnown RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 ADM5C9JUS6 153 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 HIP1RO75146 1068 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 INPP1P49441 399 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 NSUN2Q08J23 767 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 ZSCAN26Q16670 478 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 HABP4Q5JVS0 413 aaKnown RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 PPWD1Q96BP3 646 aaKnown RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 NUDCD1Q96RS6 583 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 FRMD3A2A2Y4 597 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 PSPC1Q8WXF1 523 aaKnown RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 GJB4Q9NTQ9 266 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 SLC7A5Q01650 507 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 SLFN12LQ6IEE8 588 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 HPCAL4Q9UM19 191 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 NNMTP40261 264 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 PAGE5Q96GU1 130 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 SLC9A2Q9UBY0 812 aa15.25■□□□□ 0.03
PCDHA11-201ENST00000398640 ATICP31939 592 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 CPT1AP50416 773 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 GPC3P51654 580 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 ANGPTL8Q6UXH0 198 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 PGBD3Q8N328 593 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 MCPH1Q8NEM0 835 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 GABBR1Q9UBS5 961 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 PSMA2P25787 234 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 ALCAMQ13740 583 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 PPP6R3Q5H9R7 873 aaPredicted RBP15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 ERICH1Q86X53 443 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 LRRC4BQ9NT99 713 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 CPA4Q9UI42 421 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 F5H423 210 aaPredicted RBP15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 DEFB115Q30KQ5 88 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 MTA3Q9BTC8 594 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 CAP2P40123 477 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 NBPF12Q5TAG4 269 aaPredicted RBP15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 UBE2Q2Q8WVN8 375 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 RWDD2AQ9UIY3 292 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 SLC16A4O15374 487 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 MOCS2O96007 188 aaPredicted RBP15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 SYT17Q9BSW7 474 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 FAM8A1Q9UBU6 413 aa15.24■□□□□ 0.03
PCDHA11-201ENST00000398640 PGRMC1O00264 195 aaKnown RBP15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 CAPN15O75808 1086 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 MT-ND3P03897 115 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 NFKBIAP25963 317 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 YWHAHQ04917 246 aaPredicted RBP15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 BBS9Q3SYG4 887 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 DYDC2Q96IM9 177 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 WDR19Q8NEZ3 1342 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 ZBED1O96006 694 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 LIG3P49916 1009 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 CYFIP1Q7L576 1253 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 FAM213AQ9BRX8 229 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 PHEXP78562 749 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 ANO4Q32M45 955 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 DPF2Q92785 391 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 C2orf40Q9H1Z8 148 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 PCDHA13Q9Y5I0 950 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 EVI5O60447 810 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 PLS3P13797 630 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 ADORA2BP29275 332 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 DDX53Q86TM3 631 aaKnown RBP15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 LINC00301Q8NCQ3 95 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 FAM81BQ96LP2 452 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 CASP1P29466 404 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 SLMAPQ14BN4 828 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 TRIM67Q6ZTA4 783 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 CDCA5Q96FF9 252 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 IFT43Q96FT9 208 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 SPZ1Q9BXG8 430 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 Q9H521 79 aa15.23■□□□□ 0.03
PCDHA11-201ENST00000398640 CREB3O43889 395 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 NCF2P19878 526 aaPredicted RBP15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 RCAN1P53805 252 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 UPF1Q92900 1129 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 SERPING1P05155 500 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 CXorf38Q8TB03 319 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 ESRRBO95718 433 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 NECTIN1Q15223 517 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 GLYCTKQ8IVS8 523 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 ARRDC4Q8NCT1 418 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms