RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OR52Z1P0C646 297 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 PTPRFP10586 1907 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 SYN1P17600 705 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 GCLCP48506 637 aaPredicted RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 GRIN1Q05586 938 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 ZRSR1Q15695 479 aaKnown RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 UBE2SQ16763 222 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 SPRED3Q2MJR0 410 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 C2orf27AQ580R0 203 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 PPP4R3AQ6IN85 833 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 KRBA2Q6ZNG9 492 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 PRPF38AQ8NAV1 312 aaKnown RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 CNNM3Q8NE01 707 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 C12orf42Q96LP6 360 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 AK8Q96MA6 479 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 PCDHB5Q9Y5E4 795 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 SNCAIPQ9Y6H5 919 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 ABCB11O95342 1321 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 PRR33A8MZF0 331 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 BACE1P56817 501 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 USH1GQ495M9 461 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 WDR44Q5JSH3 913 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 CCDC84Q86UT8 332 aaPredicted RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 RNF217Q8TC41 542 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 MRPL11Q9Y3B7 192 aaKnown RBP9.79□□□□□ -0.84
TPM3-213ENST00000368545 SPDYE3A6NKU9 549 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 MEIS2O14770 477 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 POLR2DO15514 142 aaKnown RBP9.78□□□□□ -0.84
TPM3-213ENST00000368545 VCAM1P19320 739 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 ITPKAP23677 461 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 RPS26P62854 115 aaKnown RBP9.78□□□□□ -0.84
TPM3-213ENST00000368545 PABPC4Q13310 644 aaKnown RBP eCLIP9.78□□□□□ -0.842e-26■■■□□ 15.7
TPM3-213ENST00000368545 MTERF2Q49AM1 385 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 SPECC1Q5M775 1068 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 MOXD1Q6UVY6 613 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 PGBD3Q8N328 593 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 ZKSCAN4Q969J2 545 aaPredicted RBP9.78□□□□□ -0.84
TPM3-213ENST00000368545 PKNOX2Q96KN3 472 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 IER2Q9BTL4 223 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 ANO3Q9BYT9 981 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 ZFATQ9P243 1243 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 COG5Q9UP83 839 aa9.78□□□□□ -0.84
TPM3-213ENST00000368545 LOC285556D6RIA3 1793 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 FAM221AA4D161 298 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 ICAM1P05362 532 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 RHOQP17081 205 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 CTGFP29279 349 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 USP11P51784 963 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 SPP2Q13103 211 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 TMEM266Q2M3C6 531 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 NCAPG2Q86XI2 1143 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 FMNL3Q8IVF7 1028 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 CEP57L1Q8IYX8 460 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 RNF214Q8ND24 703 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 SOCS4Q8WXH5 440 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 GATAD2BQ8WXI9 593 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 HHIPQ96QV1 700 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 RAB34Q9BZG1 259 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 EHMT1Q9H9B1 1298 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 ANO10Q9NW15 660 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 GABBR1Q9UBS5 961 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 PFDN2Q9UHV9 154 aa9.77□□□□□ -0.84
TPM3-213ENST00000368545 ZSWIM8A7E2V4 1837 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 SMCHD1A6NHR9 2005 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 RLFQ13129 1914 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 TPD52L2O43399 206 aaKnown RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 SNAP25P60880 206 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 FAAP100Q0VG06 881 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 CALCRLQ16602 461 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 LONRF3Q496Y0 759 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 ANO6Q4KMQ2 910 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 MAP3K21Q5TCX8 1036 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 USP17L6PQ6QN14 398 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 SPATC1Q76KD6 591 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 SAMD3Q8N6K7 520 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 IQUBQ8NA54 791 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 TMEM60Q9H2L4 133 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 TTYH1Q9H313 450 aaPredicted RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 RPAP3Q9H6T3 665 aaPredicted RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 RUBCNLQ9H714 662 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 ZFYVE1Q9HBF4 777 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 GPAMQ9HCL2 828 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 TYW1Q9NV66 732 aaKnown RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 PPP1R9AQ9ULJ8 1098 aa9.77□□□□□ -0.85
TPM3-213ENST00000368545 COL11A1P12107 1806 aaPredicted RBP9.77□□□□□ -0.85
TPM3-213ENST00000368545 LTBP2Q14767 1821 aa9.76□□□□□ -0.85
TPM3-213ENST00000368545 FLOT1O75955 427 aa9.76□□□□□ -0.85
TPM3-213ENST00000368545 RGS20O76081 388 aa9.76□□□□□ -0.85
TPM3-213ENST00000368545 GJB6O95452 261 aa9.76□□□□□ -0.85
TPM3-213ENST00000368545 SLFN14P0C7P3 912 aa9.76□□□□□ -0.85
TPM3-213ENST00000368545 SREBF1P36956 1147 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms