RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ATP4AP20648 1035 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 U2AF2P26368 475 aaKnown RBP eCLIP11.52□□□□□ -0.565e-7■■■■□ 22.9
TPM3-207ENST00000341372 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.56
TPM3-207ENST00000341372 GYS2P54840 703 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 DNM1Q05193 864 aaKnown RBP11.52□□□□□ -0.56
TPM3-207ENST00000341372 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.56
TPM3-207ENST00000341372 PPP2R5CQ13362 524 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.56
TPM3-207ENST00000341372 RAB33AQ14088 237 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 SHHQ15465 462 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 GRIK4Q16099 956 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 TMEM240Q5SV17 173 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 MARCH8Q5T0T0 291 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 RAVER1Q8IY67 606 aaKnown RBP11.52□□□□□ -0.56
TPM3-207ENST00000341372 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 HAS1Q92839 578 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 TNPO1Q92973 898 aaKnown RBP11.52□□□□□ -0.56
TPM3-207ENST00000341372 GJA10Q969M2 543 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 UIMC1Q96RL1 719 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 RPS6KC1Q96S38 1066 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 DISC1Q9NRI5 854 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 VAV3Q9UKW4 847 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 COL1A2P08123 1366 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 BACH1O14867 736 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 HBP1O60381 514 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 GJB2P29033 226 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 BIRC2Q13490 618 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 GPNMBQ14956 572 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 SWSAP1Q6NVH7 229 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 LRRC8DQ7L1W4 858 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 NOSTRINQ8IVI9 506 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 SCUBE3Q8IX30 993 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 HNRNPLLQ8WVV9 542 aaKnown RBP11.52□□□□□ -0.57
TPM3-207ENST00000341372 SCLYQ96I15 445 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 SEC16BQ96JE7 1060 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 TRIM55Q9BYV6 548 aa11.52□□□□□ -0.57
TPM3-207ENST00000341372 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 KIF28PB7ZC32 967 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 CXCL10P02778 98 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 INSRRP14616 1297 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 PAX3P23760 479 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 TRAPPC10P48553 1259 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 NASPP49321 788 aaPredicted RBP11.51□□□□□ -0.57
TPM3-207ENST00000341372 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPM3-207ENST00000341372 TAF2Q6P1X5 1199 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 TSHZ1Q6ZSZ6 1077 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 SLFN12Q8IYM2 578 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 SNX21Q969T3 373 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 TUBE1Q9UJT0 475 aa11.51□□□□□ -0.57
TPM3-207ENST00000341372 ESYT3A0FGR9 886 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 NEMFO60524 1076 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 RPLP2P05387 115 aaKnown RBP11.5□□□□□ -0.57
TPM3-207ENST00000341372 TBCELQ5QJ74 424 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 ZNF618Q5T7W0 954 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 MIER3Q7Z3K6 550 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 KIAA0907Q7Z7F0 614 aaPredicted RBP11.5□□□□□ -0.57
TPM3-207ENST00000341372 FERMT3Q86UX7 667 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 LILRB2Q8N423 598 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 SLC39A7Q92504 469 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 MTMR9Q96QG7 549 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 SMC3Q9UQE7 1217 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 ZNF862O60290 1169 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
TPM3-207ENST00000341372 ACRP10323 421 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 MBTPS1Q14703 1052 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 UGCGQ16739 394 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 RUFY4Q6ZNE9 571 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 ZNF365Q70YC5 407 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 INTS4Q96HW7 963 aaKnown RBP11.5□□□□□ -0.57
TPM3-207ENST00000341372 SAMM50Q9Y512 469 aa11.5□□□□□ -0.57
TPM3-207ENST00000341372 EML1O00423 815 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
TPM3-207ENST00000341372 CHMP2AO43633 222 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 NBNO60934 754 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 PRKCEQ02156 737 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 ZNF484Q5JVG2 852 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 EDEM1Q92611 657 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 C2orf49Q9BVC5 232 aaPredicted RBP11.49□□□□□ -0.57
TPM3-207ENST00000341372 PCDHA2Q9Y5H9 948 aa11.49□□□□□ -0.57
TPM3-207ENST00000341372 MICAL3Q7RTP6 2002 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 EVPLQ92817 2033 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 SMIM35A0A1B0GVV1 85 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 STBD1O95210 358 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 BAG4O95429 457 aaKnown RBP11.48□□□□□ -0.57
TPM3-207ENST00000341372 PDGFAP04085 211 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 THPOP40225 353 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 MGAT3Q09327 533 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 CALCRLQ16602 461 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 FOXD4L6Q3SYB3 417 aaPredicted RBP11.48□□□□□ -0.57
TPM3-207ENST00000341372 FOXD4L3Q6VB84 417 aaPredicted RBP11.48□□□□□ -0.57
TPM3-207ENST00000341372 PGBD3Q8N328 593 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 ARID2Q68CP9 1835 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 PTPRSQ13332 1948 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 RSPH10B2B2RC85 870 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms