RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 APEX2Q9UBZ4 518 aa10.16□□□□□ -0.78
TRERF1-201ENST00000340840 NUP98P52948 1817 aa10.16□□□□□ -0.78
TRERF1-201ENST00000340840 ECM29Q5VYK3 1845 aa10.16□□□□□ -0.78
TRERF1-201ENST00000340840 TRIM49P0CI25 452 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 TRIM49CP0CI26 452 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 SLC29A2Q14542 456 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 SGO2Q562F6 1265 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 KCNV1Q6PIU1 500 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 TRMT1LQ7Z2T5 733 aaKnown RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 COL23A1Q86Y22 540 aaPredicted RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 SLC35C1Q96A29 364 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 AGPAT1Q99943 283 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 OSGEPQ9NPF4 335 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 NOP53Q9NZM5 478 aaKnown RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 GSTA1P08263 222 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 NMT1P30419 496 aaKnown RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 CHRNA5P30532 468 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 RWDD2BP57060 319 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 PPP2R5AQ15172 486 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 GRIK5Q16478 980 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ECM1Q16610 540 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 EMC10Q5UCC4 262 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 TRPM8Q7Z2W7 1104 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 FBXO25Q8TCJ0 367 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 PIK3R5Q8WYR1 880 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ALG6Q9Y672 507 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ATP2A1O14983 1001 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 EIF3DO15371 548 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 EEF2P13639 858 aaKnown RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ATF2P15336 505 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ADRA2BP18089 450 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ADCY8P40145 1251 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ITIH4Q14624 930 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ZKSCAN8Q15776 578 aaPredicted RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 LRRC57Q8N9N7 239 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 RAB3IPQ96QF0 476 aaPredicted RBP10.15□□□□□ -0.78
TRERF1-201ENST00000340840 IWS1Q96ST2 819 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 WDR11Q9BZH6 1224 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 WNT8AQ9H1J5 351 aa10.15□□□□□ -0.78
TRERF1-201ENST00000340840 ACSL3O95573 720 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 KRT5P13647 590 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 COPB2P35606 906 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 PREPLQ4J6C6 727 aaPredicted RBP10.15□□□□□ -0.79
TRERF1-201ENST00000340840 SYDE2Q5VT97 1194 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 ARHGEF18Q6ZSZ5 1173 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 KCTD17Q8N5Z5 321 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 BANK1Q8NDB2 785 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 ARHGEF2Q92974 986 aaKnown RBP10.15□□□□□ -0.79
TRERF1-201ENST00000340840 CENPTQ96BT3 561 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 HOOK2Q96ED9 719 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 PGM2Q96G03 612 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 PRMT1Q99873 361 aaKnown RBP10.15□□□□□ -0.79
TRERF1-201ENST00000340840 FGFBP2Q9BYJ0 223 aa10.15□□□□□ -0.79
TRERF1-201ENST00000340840 HIP1RO75146 1068 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 PPFIA2O75334 1257 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 FGFR4P22455 802 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 FNTAP49354 379 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 VPS41P49754 854 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 SLC12A3P55017 1021 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 UAP1Q16222 522 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 BTNL9Q6UXG8 535 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 OTUD6AQ7L8S5 288 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 LRRC34Q8IZ02 419 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 RGL1Q9NZL6 768 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 SLC12A6Q9UHW9 1150 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 TMEM59LQ9UK28 342 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 LRP5O75197 1615 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 FRMD3A2A2Y4 597 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 NEBLO76041 1014 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 HOXA13P31271 388 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 GJC1P36383 396 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 MXI1P50539 228 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 MYO1EQ12965 1108 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 RASGEF1CQ8N431 466 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 BBOF1Q8ND07 529 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 HES6Q96HZ4 224 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 COA1Q9GZY4 146 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 TMEM206Q9H813 350 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 NOD2Q9HC29 1040 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 TPX2Q9ULW0 747 aaKnown RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 EXOC7Q9UPT5 735 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 CICQ96RK0 1608 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 RSPH10B2B2RC85 870 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 ASAP2O43150 1006 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 RSPH10BP0C881 870 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 POLR2MP0CAP2 368 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 BMP3P12645 472 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 CASP5P51878 434 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 MFAP3P55082 362 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 ERMARDQ5T6L9 678 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 PPP1R21Q6ZMI0 780 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 TRMT10CQ7L0Y3 403 aaKnown RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 RPUSD2Q8IZ73 545 aaKnown RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 MICAL1Q8TDZ2 1067 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 TEKT3Q9BXF9 490 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 ROPN1BQ9BZX4 212 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 THAP2Q9H0W7 228 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms