RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 IQCKQ8N0W5 287 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 SLC20A1Q8WUM9 679 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 KLHL29Q96CT2 875 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 STAMBPL1Q96FJ0 436 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 RUSC1Q9BVN2 902 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 JMJD4Q9H9V9 463 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 RIC8AQ9NPQ8 531 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 STK17AQ9UEE5 414 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 LGR5O75473 907 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 PDHA1P08559 390 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 NFIAQ12857 509 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 SEPT2Q15019 361 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 SLFN13Q68D06 897 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 PASD1Q8IV76 773 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 GPC2Q8N158 579 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 ZNF646O15015 1829 aaPredicted RBP15.74■□□□□ 0.11
PTPN9-201ENST00000306726 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 CREB1P16220 341 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
PTPN9-201ENST00000306726 ARHGEF26Q96DR7 871 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 TCP11X1B4DZS4 312 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 LAD1O00515 517 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 RPL13P26373 211 aaKnown RBP15.73■□□□□ 0.11
PTPN9-201ENST00000306726 CXCL9Q07325 125 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 MEI1Q5TIA1 1274 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 C9orf72Q96LT7 481 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 MTRF1LQ9UGC7 380 aaKnown RBP15.73■□□□□ 0.11
PTPN9-201ENST00000306726 SERPINB13Q9UIV8 391 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 TPX2Q9ULW0 747 aaKnown RBP15.73■□□□□ 0.11
PTPN9-201ENST00000306726 DIAPH2O60879 1101 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 FTLP02792 175 aaPredicted RBP15.73■□□□□ 0.11
PTPN9-201ENST00000306726 CYP11B2P19099 503 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 NEDD9Q14511 834 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 KRT35Q92764 455 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 KAT5Q92993 513 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 GMLQ99445 158 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 MYH15Q9Y2K3 1946 aa15.73■□□□□ 0.11
PTPN9-201ENST00000306726 PON1P27169 355 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 STX2P32856 288 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 RCAN1P53805 252 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 SEL1L2Q5TEA6 688 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 NEK9Q8TD19 979 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 SH3GL2Q99962 352 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 DHX36Q9H2U1 1008 aaKnown RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 ERVK-5Q9HDB9 667 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 A8MUI8 341 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 CALUO43852 315 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 ADCY8P40145 1251 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 CRKP46108 304 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 SCTRP47872 440 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 KDM7AQ6ZMT4 941 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 TPCN2Q8NHX9 752 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 TMBIM4Q9HC24 238 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 PVALEFA0A1B0GWK0 134 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 RASGRF2O14827 1237 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 RNASELQ05823 741 aaKnown RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 ITGB3BPQ13352 177 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 LLGL2Q6P1M3 1020 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 ZFPM1Q8IX07 1006 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 RNF10Q8N5U6 811 aaKnown RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 DDX23Q9BUQ8 820 aaKnown RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 COL2A1P02458 1487 aaPredicted RBP15.72■□□□□ 0.11
PTPN9-201ENST00000306726 TIAM2Q8IVF5 1701 aa15.72■□□□□ 0.11
PTPN9-201ENST00000306726 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 PMS2P54278 862 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 KNOP1Q1ED39 458 aaKnown RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 CERS5Q8N5B7 392 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 ACSF2Q96CM8 615 aaPredicted RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 SAAL1Q96ER3 474 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 BICD1Q96G01 975 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 YIPF3Q9GZM5 350 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 SH3GLB2Q9NR46 395 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 RNF181Q9P0P0 153 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 RASAL2Q9UJF2 1139 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 CLRN2A0PK11 232 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 K7ENM7 598 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 ZNF280AP59817 542 aaPredicted RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 KYNUQ16719 465 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 RBM26Q5T8P6 1007 aaKnown RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 HAS1Q92839 578 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 CHMP6Q96FZ7 201 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 ABCF3Q9NUQ8 709 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 DAGLAQ9Y4D2 1042 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 RAD17O75943 681 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 MYCLP12524 364 aaPredicted RBP15.71■□□□□ 0.11
PTPN9-201ENST00000306726 YBX3P16989 372 aaKnown RBP eCLIP15.71■□□□□ 0.112e-7■■□□□ 13.7
PTPN9-201ENST00000306726 KRT15P19012 456 aa15.71■□□□□ 0.11
PTPN9-201ENST00000306726 ARHGAP4P98171 946 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms