RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ANKRD35Q8N283 1001 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 TBK1Q9UHD2 729 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 NOC2LQ9Y3T9 749 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 CAPN6Q9Y6Q1 641 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 ATRNL1Q5VV63 1379 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 A0A0U1RQJ8 604 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 FAM237AA0A1B0GTK4 181 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 EVI5O60447 810 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 OSBPP22059 807 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 SMTNP53814 917 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 HERVK_113P62684 666 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 CAPN12Q6ZSI9 719 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 GIMAP8Q8ND71 665 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 IMPG2Q9BZV3 1241 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 GGA3Q9NZ52 723 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 ECEL1O95672 775 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 BMP6P22004 513 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 TKFCQ3LXA3 575 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 LIN9Q5TKA1 542 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 CYB5D1Q6P9G0 228 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 HPS3Q969F9 1004 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 PLAGL2Q9UPG8 496 aa12.4□□□□□ -0.42
CLSTN3-201ENST00000266546 CYTH3O43739 400 aa12.4□□□□□ -0.43
CLSTN3-201ENST00000266546 ACSL3O95573 720 aa12.4□□□□□ -0.43
CLSTN3-201ENST00000266546 PMS2P54278 862 aa12.4□□□□□ -0.43
CLSTN3-201ENST00000266546 TSC22D3Q99576 134 aa12.4□□□□□ -0.43
CLSTN3-201ENST00000266546 AZI2Q9H6S1 392 aa12.4□□□□□ -0.43
CLSTN3-201ENST00000266546 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.43
CLSTN3-201ENST00000266546 MEIS1O00470 390 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 RAD51CO43502 376 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 PLEKP08567 350 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 STRN3Q13033 797 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 PPP1R21Q6ZMI0 780 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 ZNF577Q9BSK1 485 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 FAM167BQ9BTA0 163 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 TIAM2Q8IVF5 1701 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 LRRN2O75325 713 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 IFNB1P01574 187 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 COPB2P35606 906 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 FAM186BQ8IYM0 893 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 TTC16Q8NEE8 873 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 BATF3Q9NR55 127 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 POC1B-GALNT4F8VUJ3 575 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 PODXLO00592 558 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 TXNDC9O14530 226 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 CLIC2O15247 247 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 TDP2O95551 362 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 BYSLQ13895 437 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 PLCB4Q15147 1175 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 FAM178BQ8IXR5 827 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 VCX3BQ9H321 246 aa12.39□□□□□ -0.43
CLSTN3-201ENST00000266546 A0A1W2PQJ5 194 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 SYF2O95926 243 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 PRLRP16471 622 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 EVX2Q03828 476 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 TMEM139Q8IV31 216 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 ERGIC2Q96RQ1 377 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 TNRC6CQ9HCJ0 1690 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 BRWD3Q6RI45 1802 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 MYH2Q9UKX2 1941 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 PLA2G4BP0C869 781 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 POLE2P56282 527 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 WDR44Q5JSH3 913 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 ZNF449Q6P9G9 518 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 NACC1Q96RE7 527 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 SCOCQ9UIL1 159 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 MAST2Q6P0Q8 1798 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 SKIP12755 728 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 GAP43P17677 238 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 CCND2P30279 289 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 SNX1Q13596 522 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 COG2Q14746 738 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 DDX42Q86XP3 938 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 TMEM60Q9H2L4 133 aa12.38□□□□□ -0.43
CLSTN3-201ENST00000266546 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms