RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 LINC01465Q8N7H1 131 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 TC2NQ8N9U0 490 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 CBWD1Q9BRT8 395 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 AP5M1Q9H0R1 490 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 ANKRD63C9JTQ0 380 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 MAGEB2O15479 319 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 ADCY3O60266 1144 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 CNGA1P29973 690 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 RBL2Q08999 1139 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 LAMTOR4Q0VGL1 99 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 SYCP1Q15431 976 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 BRDTQ58F21 947 aaPredicted RBP25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 EFCAB12Q6NXP0 572 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 SLC39A4Q6P5W5 647 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 PPFIBP1Q86W92 1011 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 TMEM134Q9H6X4 195 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 SUCLA2Q9P2R7 463 aaPredicted RBP25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 FRMD4BQ9Y2L6 1034 aa25.06■■□□□ 1.6
SMARCB1-201ENST00000263121 DUSP11O75319 330 aaKnown RBP25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 IGBP1P78318 339 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 IRX5P78411 483 aaPredicted RBP25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 GOLGA8FQ08AF8 430 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 GOLGA8DPQ0D2H9 430 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 CDCA2Q69YH5 1023 aaPredicted RBP25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 RETREG2Q8NC44 543 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 CD99L2Q8TCZ2 262 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 KAT2BQ92831 832 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 HSPBP1Q9NZL4 362 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 SRRDQ9UH36 339 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 SIK3Q9Y2K2 1263 aa25.05■■□□□ 1.6
SMARCB1-201ENST00000263121 EXOC3O60645 756 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 KLRC1P26715 233 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 ADSSP30520 456 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 PPFIA1Q13136 1202 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 ZBTB10Q96DT7 871 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 PYCARDQ9ULZ3 195 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 PHLPP2Q6ZVD8 1323 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 AKR1B15C9JRZ8 316 aaPredicted RBP25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 GPR25O00155 361 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 PIGRP01833 764 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 CLCN3P51790 818 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 KCNH2Q12809 1159 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 STRN3Q13033 797 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 GRIK4Q16099 956 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 XXYLT1Q8NBI6 393 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 PCIF1Q9H4Z3 704 aa25.04■■□□□ 1.6
SMARCB1-201ENST00000263121 K7ERI5 159 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 HNRNPDLO14979 420 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 MAPK13O15264 365 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 MFAP3LO75121 409 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 MSNP26038 577 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 HOXD10P28358 340 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 CASP14P31944 242 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 FXR1P51114 621 aaKnown RBP eCLIP25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 EFNA5P52803 228 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 ADKP55263 362 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 TRIM32Q13049 653 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 MTHFD1LQ6UB35 978 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 METTL13Q8N6R0 699 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 SLC35C1Q96A29 364 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 TTYH3Q9C0H2 523 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 CCDC113Q9H0I3 377 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 TMX1Q9H3N1 280 aa25.03■■□□□ 1.6
SMARCB1-201ENST00000263121 HAS3O00219 553 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 ASAP2O43150 1006 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 KLK7P49862 253 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 CACNB2Q08289 660 aaPredicted RBP25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 FSCN1Q16658 493 aaKnown RBP25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 FIGNQ5HY92 759 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 MARCH8Q5T0T0 291 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 RHPN2Q8IUC4 686 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 NUP58Q9BVL2 599 aa25.02■■□□□ 1.6
SMARCB1-201ENST00000263121 SEPT4O43236 478 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 AFPP02771 609 aaKnown RBP25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 TPM1P09493 284 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 SKILP12757 684 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 GARTP22102 1010 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 GJA9P57773 515 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 BEX3Q00994 111 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 TFDP1Q14186 410 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 CNGA4Q8IV77 575 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 CCDC155Q8N6L0 562 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 RNF149Q8NC42 400 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 CPLX3Q8WVH0 158 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 BICD1Q96G01 975 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 UPF3AQ9H1J1 476 aaKnown RBP25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 C2orf40Q9H1Z8 148 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 STYXL1Q9Y6J8 313 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 RRN3P2A6NIE6 340 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 RNF225M0QZC1 329 aaPredicted RBP25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 GNRH1P01148 92 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 GJB1P08034 283 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 SRGAP2CP0DJJ0 459 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 NKX3-2P78367 333 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 KCNMA1Q12791 1236 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 MFSD10Q14728 455 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 KIAA0753Q2KHM9 967 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 DCAF17Q5H9S7 520 aaPredicted RBP25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 CCDC112Q8NEF3 446 aa25.01■■□□□ 1.59
SMARCB1-201ENST00000263121 ZSWIM2Q8NEG5 633 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms