RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CCDC60Q8IWA6 550 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 ACBD3Q9H3P7 528 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 BRCA2P51587 3418 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 ZNF862O60290 1169 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 DSG3P32926 999 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 SUPT20HL1Q3ZLR7 823 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 PPP1R13LQ8WUF5 828 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 IFT81Q8WYA0 676 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 TSGA10Q9BZW7 698 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 ACAD9Q9H845 621 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 MYO1AQ9UBC5 1043 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 GREB1LQ9C091 1923 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 SND1Q7KZF4 910 aaKnown RBP eCLIP15.89■□□□□ 0.139e-6■■□□□ 12.1
TRAFD1-201ENST00000257604 CDR2LQ86X02 465 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 OSBPL9Q96SU4 736 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 JPH1Q9HDC5 661 aaPredicted RBP15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 HSPBP1Q9NZL4 362 aa15.89■□□□□ 0.13
TRAFD1-201ENST00000257604 SPDYE16A6NNV3 312 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 PAFAH1B1P43034 410 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 SP2Q02086 613 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 PPP3CAQ08209 521 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 SLC18A3Q16572 532 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 TRIM50Q86XT4 487 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 VPS33BQ9H267 617 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 CD2APQ9Y5K6 639 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 LMNB1P20700 586 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 MAGEA9P43362 315 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 SMTNP53814 917 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 BFSP1Q12934 665 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 C2CD6Q53TS8 623 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 VSIG10LQ86VR7 867 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 FAM213AQ9BRX8 229 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 INTS2Q9H0H0 1204 aaKnown RBP15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 CYP39A1Q9NYL5 469 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 JRKLQ9Y4A0 524 aa15.88■□□□□ 0.13
TRAFD1-201ENST00000257604 FOXN3O00409 490 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 USP2O75604 605 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 RGS20O76081 388 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 NPTX2P47972 431 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 ACOT2P49753 483 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 POLGP54098 1239 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 ACTR2P61160 394 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 PRKCEQ02156 737 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 PALB2Q86YC2 1186 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 SH2D3CQ8N5H7 860 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 ACCSQ96QU6 501 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 AP1M1Q9BXS5 423 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 OSGEPQ9NPF4 335 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 MED4Q9NPJ6 270 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 ZSCAN5CA6NGD5 496 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 ATMINO43313 823 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 CEP104O60308 925 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 PLS3P13797 630 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 DAAM2Q86T65 1068 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 VPS36Q86VN1 386 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 SELENOOQ9BVL4 669 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 PLCB1Q9NQ66 1216 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 SLC9A2Q9UBY0 812 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 ZEB2O60315 1214 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 VAMP7P51809 220 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 TUBB2AQ13885 445 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 FBXW10Q5XX13 1052 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 WDR93Q6P2C0 686 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 IRF2BP2Q7Z5L9 587 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 SLC20A1Q8WUM9 679 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 TAF4BQ92750 862 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 GLG1Q92896 1179 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 TUBB2BQ9BVA1 445 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 CENPHQ9H3R5 247 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 TAS2R14Q9NYV8 317 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 SNX12Q9UMY4 172 aa15.87■□□□□ 0.13
TRAFD1-201ENST00000257604 KRT5P13647 590 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 TNFAIP3P21580 790 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 OSTNP61366 133 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 IGBP1P78318 339 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 MAP3K10Q02779 954 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 LY6KQ17RY6 165 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 PHLDB3Q6NSJ2 640 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 CATSPERGQ6ZRH7 1159 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 XXYLT1Q8NBI6 393 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 BTBD7Q9P203 1132 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 ODF2LQ9ULJ1 636 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 POLR2AP24928 1970 aaKnown RBP15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 PLA2G6O60733 806 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 CSDE1O75534 798 aaKnown RBP15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 CNGA1P29973 690 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 ARHGEF19Q8IW93 802 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms