RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 OCRLQ01968 901 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 SIM2Q14190 667 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 PRR16Q569H4 304 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 FAM196AQ6ZSG2 479 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 INTS8Q75QN2 995 aaKnown RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 NCOA7Q8NI08 942 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 UBLCP1Q8WVY7 318 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 DDX27Q96GQ7 796 aaKnown RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 DHTKD1Q96HY7 919 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 RBM17Q96I25 401 aaKnown RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 VCPIP1Q96JH7 1222 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 FNBP1Q96RU3 617 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 ANKRD2Q9GZV1 360 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 ARNT2Q9HBZ2 717 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 CNTN3Q9P232 1028 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.9□□□□□ -1.78
RTTN-201ENST00000255674 ACTN4O43707 911 aaKnown RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 CYTH3O43739 400 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 GBP1P32455 592 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 TOB1P50616 345 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 LBX1P52954 281 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 PPATQ06203 517 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 IFT88Q13099 833 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 ERCC6LQ2NKX8 1250 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 WDR44Q5JSH3 913 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 SEL1L2Q5TEA6 688 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 SPATA5Q8NB90 893 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 POMGNT1Q8WZA1 660 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 ZNF653Q96CK0 615 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 CTAGE1Q96RT6 745 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.9□□□□□ -1.78
RTTN-201ENST00000255674 BRD8Q9H0E9 1235 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 PPCSQ9HAB8 311 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 RNF181Q9P0P0 153 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 SAMD15Q9P1V8 674 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 FAM8A1Q9UBU6 413 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 TRPC5Q9UL62 973 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 SRPRBQ9Y5M8 271 aaKnown RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 MGEA5O60502 916 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 RPS6KB1P23443 525 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 GTF2A1P52655 376 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 GCNT1Q02742 428 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 CALCOCO2Q13137 446 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 NEDD9Q14511 834 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 ZNF772Q68DY9 489 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 CC2D1AQ6P1N0 951 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 PDZD4Q76G19 769 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 GALNT7Q86SF2 657 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 MLKLQ8NB16 471 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 PLIN2Q99541 437 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 THUMPD2Q9BTF0 503 aaKnown RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 GGT7Q9UJ14 662 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 ZNF214Q9UL59 606 aaPredicted RBP3.9□□□□□ -1.78
RTTN-201ENST00000255674 TSC22D4Q9Y3Q8 395 aa3.9□□□□□ -1.78
RTTN-201ENST00000255674 C2orf81A6NN90 581 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 CCDC169A6NNP5 214 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 HGSO14964 777 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 UBXN2AP68543 259 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 INCA1Q0VD86 236 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 TRPC3Q13507 836 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 MCM6Q14566 821 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 HERC4Q5GLZ8 1057 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 CDCA2Q69YH5 1023 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 PRR5LQ6MZQ0 368 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 ZNF804AQ7Z570 1209 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 ZSCAN30Q86W11 494 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 TDRD5Q8NAT2 981 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 GLG1Q92896 1179 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 PGM2Q96G03 612 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 VCX3BQ9H321 246 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 COG4Q9H9E3 785 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 MTRF1LQ9UGC7 380 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 FRMD4BQ9Y2L6 1034 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 TLN1Q9Y490 2541 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 RASSF10A6NK89 507 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 F6X3S4 739 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 POTEIP0CG38 1075 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 INPP1P49441 399 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 ZNF132P52740 706 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 ZNF135P52742 658 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 RASGRF1Q13972 1273 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 CCDC85BQ15834 202 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 ILDR2Q71H61 639 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 LCA5Q86VQ0 697 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 CDC26Q8NHZ8 85 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 SLC9A7Q96T83 725 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 P2RX7Q99572 595 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 DHRS4Q9BTZ2 278 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 MLXIPQ9HAP2 919 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 HAUS2Q9NVX0 235 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 ALKBH4Q9NXW9 302 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 CTNNAL1Q9UBT7 734 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 CCNL1Q9UK58 526 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 CCDC151A5D8V7 595 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 DKC1O60832 514 aaKnown RBP eCLIP3.9□□□□□ -1.79
RTTN-201ENST00000255674 STMN1P16949 149 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 SYKP43405 635 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 LIMK1P53667 647 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 RIPK1Q13546 671 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 RBBP5Q15291 538 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms