RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 NAP1L1P55209 391 aaKnown RBP16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 GRB10Q13322 594 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 NAB2Q15742 525 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 TMEM119Q4V9L6 283 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 PPP4R3AQ6IN85 833 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 LRIG3Q6UXM1 1119 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 PBKQ96KB5 322 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 MMTAG2Q9BU76 263 aaKnown RBP16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 RIOX1Q9H6W3 641 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 DUSP10Q9Y6W6 482 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
KNSTRN-201ENST00000249776 GOLGA6L10A6NI86 522 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 ADAMTS3O15072 1205 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 ZNF865P0CJ78 1059 aaPredicted RBP16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 MYBL2P10244 700 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 TXKP42681 527 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 SNAP25P60880 206 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 SETQ01105 290 aaPredicted RBP16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 KLHDC7AQ5VTJ3 777 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 MCTP2Q6DN12 878 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 FAM133AQ8N9E0 248 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 LMBR1Q8WVP7 490 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 BLOC1S4Q9NUP1 217 aa16.86■□□□□ 0.29
KNSTRN-201ENST00000249776 MCM3APO60318 1980 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 MYMKA6NI61 221 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 ZMYND10O75800 440 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 SNAI1O95863 264 aaPredicted RBP16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 EHHADHQ08426 723 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 CUL1Q13616 776 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 MMS22LQ6ZRQ5 1243 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 LRRC55Q6ZSA7 311 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 YTHDF3Q7Z739 585 aaKnown RBP16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 FGD4Q96M96 766 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 TLR10Q9BXR5 811 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 ABHD16BQ9H3Z7 469 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 DMGDHQ9UI17 866 aaKnown RBP16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 TFR2Q9UP52 801 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 PCDHGC5Q9Y5F6 944 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 FAM169AQ9Y6X4 670 aa16.85■□□□□ 0.29
KNSTRN-201ENST00000249776 ASB14A6NK59 587 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 CCT5P48643 541 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 SLC18A3Q16572 532 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 HYIQ5T013 277 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 NFRKBQ6P4R8 1299 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 FOXR1Q6PIV2 292 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 FMNL3Q8IVF7 1028 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 C7orf61Q8IZ16 206 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 LRRC45Q96CN5 670 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 CALR3Q96L12 384 aaKnown RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 PNMA5Q96PV4 448 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 SENP6Q9GZR1 1112 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 XPNPEP3Q9NQH7 507 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 CYP39A1Q9NYL5 469 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 PLEKP08567 350 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 GTF2A1P52655 376 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 LRRC41Q15345 812 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 CLUL1Q15846 466 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 HABP4Q5JVS0 413 aaKnown RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 GJC2Q5T442 439 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 RNF180Q86T96 592 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 AIPL1Q9NZN9 384 aa16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 COLQQ9Y215 455 aaPredicted RBP16.84■□□□□ 0.29
KNSTRN-201ENST00000249776 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 TULP1O00294 542 aaPredicted RBP16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 CDR1P51861 262 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 DRP2Q13474 957 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 MTMR3Q13615 1198 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 ACVR2BQ13705 512 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 ASIC2Q16515 512 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 EDRF1Q3B7T1 1238 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 FAM26FQ5R3K3 315 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 MEI1Q5TIA1 1274 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 HGSNATQ68CP4 663 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 NSMFQ6X4W1 530 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 GSPT2Q8IYD1 628 aaKnown RBP16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 IQCKQ8N0W5 287 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 LRRC15Q8TF66 581 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 DDX12PQ92771 950 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 DRC1Q96MC2 740 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 CEP89Q96ST8 783 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 MAF1Q9H063 256 aa16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.83■□□□□ 0.28
KNSTRN-201ENST00000249776 CCDC188H7C350 402 aa16.82■□□□□ 0.28
KNSTRN-201ENST00000249776 NDUFAB1O14561 156 aa16.82■□□□□ 0.28
KNSTRN-201ENST00000249776 MARCH6O60337 910 aa16.82■□□□□ 0.28
KNSTRN-201ENST00000249776 HEXIM1O94992 359 aaKnown RBP16.82■□□□□ 0.28
KNSTRN-201ENST00000249776 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms