RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Ccdc159Q8C963 411 aa19.6■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Twf1Q91YR1 350 aaKnown RBP19.6■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Med24Q99K74 987 aa19.6■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Syap1Q9D5V6 365 aa19.6■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Kansl3A2RSY1 903 aaKnown RBP19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Krt36B1AQ75 473 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Ext2P70428 718 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 PolrmtQ8BKF1 1207 aaKnown RBP19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Tmem60Q8K174 133 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Wbp11Q923D5 641 aaKnown RBP19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 EpgnQ924X1 152 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Got1P05201 413 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 HelqQ2VPA6 1069 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Gngt2Q61017 69 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Fbxo28Q8BIG4 368 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Calhm6Q8C9E8 313 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Ttc13A0A1L1SSC7 844 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 AfmO89020 608 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Smad1P70340 465 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Epc1Q8C9X6 813 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Usp15Q8R5H1 981 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Pcdha11Q91Y19 950 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Gdf10P97737 476 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Gcnt1Q09324 428 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 AdigQ8R400 80 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Wdr19Q3UGF1 1341 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Abcb11Q9QY30 1321 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Lrrc38A2VDH3 298 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Herc3A6H6S0 1050 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 JrklB2RRL2 523 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Arhgef26D3YYY8 869 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Pja1O55176 578 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Ctnnd1P30999 938 aaKnown RBP19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Capn13Q3UW68 665 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Fam102aQ78T81 392 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Sept12Q9D451 317 aa19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Celf2Q9Z0H4 508 aaKnown RBP19.59■□□□□ 0.73
Scaf11-201ENSMUST00000047835 P2rx5Q3UYI1 455 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 PRAG1Q571I4 1179 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Rps6ka5Q8C050 863 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Ccz1Q8C1Y8 480 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Gyg1Q9R062 333 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Nrxn1Q9CS84 1514 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Rgs12Q8CGE9 1381 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Efna5O08543 228 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Uhmk1P97343 419 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 SpertQ32MG2 446 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Dnaaf1Q9D2H9 634 aa19.58■□□□□ 0.73
Scaf11-201ENSMUST00000047835 Pla2g4cQ64GA5 597 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 DaglaQ6WQJ1 1044 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 AdgbG3UZ78 1657 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Syngap1F6SEU4 1340 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 PrkceP16054 737 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Mylk3Q3UIZ8 795 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Rhox12Q4TU81 186 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Gm5622Q810Q0 167 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Gdap1l1Q8VE33 370 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Trim42Q9D2H5 723 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Asah2Q9JHE3 756 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 RpgrQ9R0X5 1001 aa19.58■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Nfe2Q07279 373 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Bzw1Q9CQC6 419 aaKnown RBP19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Emc2Q9CRD2 297 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Trpc4Q9QUQ5 974 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Gm28043E0CXC2 719 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 GclmO09172 274 aaKnown RBP19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Grin1P35438 938 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 EnahQ03173 802 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 SucoQ8C341 1250 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 SyncQ9EPM5 470 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Rfpl4bJ3QPR6 266 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Guca2bO09051 106 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Cspg5Q71M36 566 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 HlcsQ920N2 722 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 NonoQ99K48 473 aaKnown RBP19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Taf1dQ9D4V4 322 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Cpb2Q9JHH6 422 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Klra10Q9R1G6 266 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Fam81aQ3UXZ6 364 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Ece1Q4PZA2 769 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 HunkO88866 714 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Q3KNL4 93 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Nr2c1Q505F1 590 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Spdye4aQ5IBH6 268 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Atg4cQ811C2 458 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Agap1Q8BXK8 857 aaKnown RBP19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Nemp2Q8CB65 421 aa19.57■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Usp10P52479 792 aaKnown RBP19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Ifnl2Q4VK74 193 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Slc5a4aQ9ET37 656 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Nudt5Q9JKX6 218 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Fmnl1Q9JL26 1094 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Zfyve9A2A8R0 1397 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Celf5D3Z4T1 395 aaKnown RBP19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Tgfb2P27090 414 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Rtkn2Q14B46 604 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Olfr119Q7TRJ5 321 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Extl2Q9ES89 330 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Cyp39a1Q9JKJ9 470 aa19.56■□□□□ 0.72
Scaf11-201ENSMUST00000047835 Serpina16D3Z660 418 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms