RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Vps52Q8C754 723 aaKnown RBP24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Olfr395Q8VGR3 312 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ino80bQ99PT3 375 aaKnown RBP24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Dennd4aE9Q8V6 1869 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Gm9857F7CXR1 130 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Kcnh2O35219 1162 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 DeptorQ570Y9 409 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ctnna3Q65CL1 895 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Q8BGN9 141 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Nop9Q8BMC4 636 aaKnown RBP24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Acot11Q8VHQ9 594 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Hspbp1Q99P31 357 aaKnown RBP24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Apopt1Q9CQW7 192 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tmem206Q9D771 350 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Fut2Q9JL27 347 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Krt28A6BLY7 462 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Clca3bE9PUL3 1044 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Cyp2f2P33267 491 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 ZbbxQ0P5X5 716 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 LbpQ61805 481 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Pramel7Q810Y8 479 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Oit3Q8R4V5 546 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Xpo5Q924C1 1204 aaKnown RBP24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Slc12a9Q99MR3 914 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Pidd1Q9ERV7 915 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Olig1Q9JKN5 260 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Atp1a4Q9WV27 1032 aa24.89■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ap1b1O35643 943 aaKnown RBP24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 RaraP11416 462 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Kcnj4P52189 445 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 CiitaP79621 1155 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tubb2aQ7TMM9 445 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Micall1Q8BGT6 870 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tmco3Q8BH01 678 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Wdr3Q8BHB4 942 aaKnown RBP24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Gpr180Q8BPS4 441 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 BrdtQ91Y44 956 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Rtfdc1Q99K95 307 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tubb2bQ9CWF2 445 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mfap3lQ9D3X9 409 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mettl7bQ9DD20 244 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mbtps1Q9WTZ2 1052 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Vstm4T1NXB5 319 aa24.89■■□□□ 1.57
Upf3a-201ENSMUST00000043767 TroapB7ZNG4 668 aa24.88■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Gm3138K7N754 218 aa24.88■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mcf2lQ64096 1149 aa24.88■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Slc7a6osQ7TPE5 306 aa24.88■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ppp1r16bQ8VHQ3 568 aa24.88■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Smtnl1Q99LM3 459 aa24.88■■□□□ 1.57
Upf3a-201ENSMUST00000043767 GcP21614 476 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Irf8P23611 424 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ppp2r5aQ6PD03 486 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ano5Q75UR0 904 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mindy1Q76LS9 468 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 RbsnQ80Y56 783 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ppme1Q8BVQ5 386 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Pym1Q8CHP5 203 aaKnown RBP24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 CbsQ91WT9 561 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Zfp623Q9CY99 499 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tlr5Q9JLF7 859 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Apol6B7ZC55 329 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Nfxl1E9Q8I7 918 aaKnown RBP24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Cct6aP80317 531 aaKnown RBP24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mgat3Q10470 538 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 SlmapQ3URD3 845 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Olfr390Q8VEZ7 311 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ddx25Q9QY15 484 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mia3Q8BI84 1930 aa24.87■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Otud7bB2RUR8 840 aa24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Itgb7P26011 806 aa24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Scyl2Q8CFE4 930 aa24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tcp11l2Q8K1H7 517 aa24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Znf131Q8K3J5 619 aa24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Eef1gQ9D8N0 437 aaKnown RBP24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Rwdd2aQ9D9S3 292 aa24.86■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Men1O88559 611 aaKnown RBP24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tubb4bP68372 445 aaKnown RBP24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Cd37Q61470 281 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Dlg4Q62108 724 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 TxlnaQ6PAM1 554 aaKnown RBP24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Nacc1Q7TSZ8 514 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ppfibp1Q8C8U0 969 aaKnown RBP24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Efcab8Q8C9R9 203 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Vmn1r191Q8K4D0 298 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ccdc12Q8R344 166 aaKnown RBP24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Olfr805Q8VFI4 319 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Fam111aQ9D2L9 613 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Lcmt1A0A0U1RNF2 332 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Snx27Q3UHD6 539 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 FcgrtQ61559 365 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Grik4Q8BMF5 956 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tcaf1Q8BNE1 924 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Rapgef5Q8C0Q9 814 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Phldb2Q8K1N2 1249 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 AagabQ8R2R3 316 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Desi2Q9D291 194 aa24.85■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tpp1O89023 562 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Mdh1P14152 334 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Fmr1P35922 614 aaKnown RBP24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Dnm2P39054 870 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms