RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gm8257E9Q8R3 264 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Casp2P29594 452 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Pth1rP41593 591 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Gjb6P70689 261 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Rgl1Q60695 768 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 PigsQ6PD26 555 aaKnown RBP17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Q8C5C9 218 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Pcdhb2Q91Y00 799 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Dip2bQ3UH60 1574 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Gstt1Q64471 240 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Klhl38Q8BSF5 581 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 4932411N23RikQ8C0S0 470 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Clptm1Q8VBZ3 664 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Gfpt2Q9Z2Z9 682 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ttc37F8VPK0 1563 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Oip5A2AQ14 241 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 PtprcP06800 1291 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Hps5P59438 1126 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 1700013H16RikQ9DAC5 291 aa17.78■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Arhgef10lA2AWP8 1280 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Casp12O08736 419 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Calb1P12658 261 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ftl1P29391 183 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ppp1r14cQ8R4S0 164 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Trim5E9PV98 497 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Snap25P60879 206 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Hspa8P63017 646 aaKnown RBP17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Spag6Q3V0U9 509 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Znf280dQ68FE8 974 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Alx1Q8C8B0 326 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Tmod4Q9JLH8 345 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Zcchc11B2RX14 1644 aaKnown RBP17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Msh2P43247 935 aaKnown RBP17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Carmil2Q3V3V9 1296 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 FntaQ61239 377 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Lilrb4Q64281 335 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 AmphQ7TQF7 686 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Ints5Q8CHT3 1018 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Tmem47Q9JJG6 181 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Chd1P40201 1711 aa17.77■□□□□ 0.44
Col17a1-201ENSMUST00000026045 Chp1P61022 195 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Cfap61Q8CEL2 1252 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Fam192aQ91WE2 254 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Tuba8Q9JJZ2 449 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Tnip3A0A1D5RMN0 279 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Akr1b7P21300 316 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Pold1P52431 1105 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Plcg2Q8CIH5 1265 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Swi5Q8K3D3 89 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Coq6Q8R1S0 476 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Slc35c2Q8VCX2 364 aa17.77■□□□□ 0.43
Col17a1-201ENSMUST00000026045 NsfP46460 744 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Yy1Q00899 414 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 RereQ80TZ9 1558 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Eepd1Q3TGW2 569 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Fsd1lQ8BYN5 507 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 PorP37040 678 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Mettl13Q91YR5 698 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Klrb1fQ8VD98 217 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Llcfc1Q9D9P8 108 aa17.76■□□□□ 0.43
Col17a1-201ENSMUST00000026045 A0A286YCQ6 122 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Ezh1P70351 747 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 CerkQ8K4Q7 531 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Rbm31yQ9D3U4 565 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Rtn3Q9ES97 964 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Rgs9O54828 675 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Ccng1P51945 294 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Ttc39bQ8BYY4 617 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Pdik1lQ8QZR7 341 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Rev1Q920Q2 1249 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 4930550L24RikQ99PA7 320 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Nphs1Q9QZS7 1256 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Mphosph8Q3TYA6 858 aaKnown RBP17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Slc9a2Q3ZAS0 814 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Flot2Q60634 428 aaKnown RBP17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Itih3Q61704 889 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 LRWD1Q8BUI3 648 aaKnown RBP17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Myo5cE9Q1F5 1742 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 PltpP55065 493 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Slc7a1Q09143 622 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Krt31Q61765 416 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Vmn1r199Q8R280 367 aa17.75■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Gm3173A6NAS3 172 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Gm3020E9Q3J7 150 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Gm2897K7N6T7 172 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Kmt5aQ2YDW7 349 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Patl1Q3TC46 770 aaKnown RBP17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Olfml2bQ3V1G4 746 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Brinp3Q499E0 766 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Gm3411Q8C7R2 150 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Tor1aip1Q921T2 595 aaKnown RBP17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Polr3cQ9D483 533 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Hspa4lP48722 838 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Tmem120bQ3TA38 339 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Ddx3xQ62167 662 aaKnown RBP17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Olfr301Q7TS04 311 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Smyd3Q9CWR2 428 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Gm29133A0A1B0GT72 266 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Sdccag3A2AIW0 432 aa17.74■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Msr1P30204 458 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms