RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 CBP2P03874 630 aaPredicted RBP-0.1□□□□□ -2.43
snR52snR52 NRP1P32770 719 aaKnown RBP RIP-Chip data-0.1□□□□□ -2.43not detected
snR52snR52 ZTA1P38230 334 aaKnown RBP-0.1□□□□□ -2.43
snR52snR52 SLM4P38247 162 aa-0.1□□□□□ -2.43
snR52snR52 MNL1P38888 796 aa-0.1□□□□□ -2.43
snR52snR52 PAC11P40960 533 aa-0.1□□□□□ -2.43
snR52snR52 LCB2P40970 561 aa-0.1□□□□□ -2.43
snR52snR52 NUP49Q02199 472 aa-0.1□□□□□ -2.43
snR52snR52 UBA3Q99344 299 aa-0.1□□□□□ -2.43
snR52snR52 MRPL20P22354 195 aaPredicted RBP-0.11□□□□□ -2.43
snR52snR52 TRX2P22803 104 aaKnown RBP-0.11□□□□□ -2.43
snR52snR52 YOR062CP36025 268 aa-0.11□□□□□ -2.43
snR52snR52 SER3P40054 469 aa-0.11□□□□□ -2.43
snR52snR52 EPL1P43572 832 aa-0.11□□□□□ -2.43
snR52snR52 YJR141WP47172 347 aaPredicted RBP-0.11□□□□□ -2.43
snR52snR52 PRR2Q12310 699 aa-0.11□□□□□ -2.43
snR52snR52 ERP3Q12403 225 aa-0.11□□□□□ -2.43
snR52snR52 YSC83P32792 385 aa-0.12□□□□□ -2.43
snR52snR52 KDX1P36005 433 aa-0.12□□□□□ -2.43
snR52snR52 YHR045WP38775 560 aa-0.12□□□□□ -2.43
snR52snR52 DSE1P40077 573 aa-0.12□□□□□ -2.43
snR52snR52 TPC1P53257 314 aa-0.12□□□□□ -2.43
snR52snR52 RTT102P53330 157 aa-0.12□□□□□ -2.43
snR52snR52 SPO77Q06134 477 aa-0.12□□□□□ -2.43
snR52snR52 CTS2Q06350 511 aa-0.12□□□□□ -2.43
snR52snR52 TAF10Q12030 206 aa-0.12□□□□□ -2.43
snR52snR52 DET1Q99288 334 aaKnown RBP-0.12□□□□□ -2.43
snR52snR52 RRT12P25381 491 aa-0.13□□□□□ -2.43
snR52snR52 ATG15P25641 520 aa-0.13□□□□□ -2.43
snR52snR52 VAM7P32912 316 aa-0.13□□□□□ -2.43
snR52snR52 PEX5P35056 612 aa-0.13□□□□□ -2.43
snR52snR52 MRPL49P40858 161 aaPredicted RBP-0.13□□□□□ -2.43
snR52snR52 HIT1P46973 164 aa-0.13□□□□□ -2.43
snR52snR52 ROY1Q04847 553 aa-0.13□□□□□ -2.43
snR52snR52 YLR456WQ06199 204 aa-0.13□□□□□ -2.43
snR52snR52 AAD15Q08361 143 aa-0.13□□□□□ -2.43
snR52snR52 AGC1Q12482 902 aa-0.13□□□□□ -2.43
snR52snR52 CDC7P06243 507 aa-0.14□□□□□ -2.43
snR52snR52 DPB3P27344 201 aa-0.14□□□□□ -2.43
snR52snR52 RIM1P32445 135 aaKnown RBP-0.14□□□□□ -2.43
snR52snR52 EDC2P40023 145 aaPredicted RBP-0.14□□□□□ -2.43
snR52snR52 UTP25P40498 721 aaKnown RBP-0.14□□□□□ -2.43
snR52snR52 RTS3P53289 263 aa-0.14□□□□□ -2.43
snR52snR52 YGR266WP53326 701 aa-0.14□□□□□ -2.43
snR52snR52 SLM2P53955 656 aa-0.14□□□□□ -2.43
snR52snR52 TRM44Q02648 567 aaKnown RBP-0.14□□□□□ -2.43
snR52snR52 VPS72Q03388 795 aa-0.14□□□□□ -2.43
snR52snR52 RRB1Q04225 511 aaKnown RBP-0.14□□□□□ -2.43
snR52snR52 SHS1Q07657 551 aa-0.14□□□□□ -2.43
snR52snR52 YOL162WP0CF19 215 aa-0.15□□□□□ -2.43
snR52snR52 YCR051WP25631 222 aa-0.15□□□□□ -2.43
snR52snR52 GLE2P40066 365 aa-0.15□□□□□ -2.43
snR52snR52 OSH6Q02201 448 aa-0.15□□□□□ -2.43
snR52snR52 SPH1Q06160 661 aa-0.15□□□□□ -2.43
snR52snR52 NDL1Q06568 189 aa-0.15□□□□□ -2.43
snR52snR52 YPL247CQ12523 523 aa-0.15□□□□□ -2.43
snR52snR52 YRF1-4O13559 1382 aa-0.16□□□□□ -2.43
snR52snR52 TDH1P00360 332 aaKnown RBP-0.16□□□□□ -2.44
snR52snR52 YCR102CP25608 368 aa-0.16□□□□□ -2.44
snR52snR52 PHO91P27514 894 aa-0.16□□□□□ -2.44
snR52snR52 VPH2P32341 215 aa-0.16□□□□□ -2.44
snR52snR52 PMT4P46971 762 aa-0.16□□□□□ -2.44
snR52snR52 CAB4P53332 305 aa-0.16□□□□□ -2.44
snR52snR52 MIM1Q08176 113 aa-0.16□□□□□ -2.44
snR52snR52 PFK27Q12471 397 aaPredicted RBP-0.16□□□□□ -2.44
snR52snR52 YAL063C-AQ3E791 96 aa-0.16□□□□□ -2.44
snR52snR52 URA7P28274 579 aaKnown RBP-0.17□□□□□ -2.44
snR52snR52 PCH2P38126 564 aa-0.17□□□□□ -2.44
snR52snR52 COG3P40094 801 aa-0.17□□□□□ -2.44
snR52snR52 BIO4P53630 237 aa-0.17□□□□□ -2.44
snR52snR52 GRH1Q04410 372 aaKnown RBP-0.17□□□□□ -2.44
snR52snR52 RPN5Q12250 445 aaKnown RBP-0.17□□□□□ -2.44
snR52snR52 RRI2Q12348 645 aa-0.17□□□□□ -2.44
snR52snR52 RPN6Q12377 434 aa-0.17□□□□□ -2.44
snR52snR52 REC107P21651 314 aa-0.18□□□□□ -2.44
snR52snR52 SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.18□□□□□ -2.44not detected
snR52snR52 MPE1P35728 441 aaKnown RBP-0.18□□□□□ -2.44
snR52snR52 YHR182WP38870 785 aa-0.18□□□□□ -2.44
snR52snR52 FCF1Q05498 189 aaPredicted RBP-0.18□□□□□ -2.44
snR52snR52 BUR2Q05949 395 aa-0.18□□□□□ -2.44
snR52snR52 ISA2Q12425 185 aa-0.18□□□□□ -2.44
snR52snR52 AFI1Q99222 893 aa-0.18□□□□□ -2.44
snR52snR52 MRP7P12687 371 aa-0.19□□□□□ -2.44
snR52snR52 YKR045CP36138 183 aa-0.19□□□□□ -2.44
snR52snR52 SRP72P38688 640 aaKnown RBP-0.19□□□□□ -2.44
snR52snR52 YHR177WP38867 453 aa-0.19□□□□□ -2.44
snR52snR52 FAD1P38913 306 aa-0.19□□□□□ -2.44
snR52snR52 YDR089WP38966 869 aa-0.19□□□□□ -2.44
snR52snR52 PEP8P40335 379 aa-0.19□□□□□ -2.44
snR52snR52 ALG9P53868 555 aaKnown RBP-0.19□□□□□ -2.44
snR52snR52 CIK1Q01649 594 aa-0.19□□□□□ -2.44
snR52snR52 YDR541CQ03049 344 aa-0.19□□□□□ -2.44
snR52snR52 SVL3Q03088 825 aaKnown RBP-0.19□□□□□ -2.44
snR52snR52 YOR268CQ08734 132 aa-0.19□□□□□ -2.44
snR52snR52 MED1Q12321 566 aa-0.19□□□□□ -2.44
snR52snR52 SGA1P08019 549 aa-0.2□□□□□ -2.44
snR52snR52 COY1P34237 679 aa-0.2□□□□□ -2.44
snR52snR52 MYO3P36006 1272 aa-0.2□□□□□ -2.44
snR52snR52 TAF11Q04226 346 aa-0.2□□□□□ -2.44
snR52snR52 YPR078CQ06813 372 aa-0.2□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 125.8 ms