RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B NUP49Q02199 472 aa-0.15□□□□□ -2.43
snR39BsnR39B ROY1Q04847 553 aa-0.15□□□□□ -2.43
snR39BsnR39B NSE1Q07913 336 aa-0.15□□□□□ -2.43
snR39BsnR39B PGA3Q12746 312 aaKnown RBP-0.15□□□□□ -2.43
snR39BsnR39B HIS3P06633 220 aa-0.16□□□□□ -2.44
snR39BsnR39B CKA1P15790 372 aa-0.16□□□□□ -2.44
snR39BsnR39B RRP7P25368 297 aaPredicted RBP-0.16□□□□□ -2.44
snR39BsnR39B KDX1P36005 433 aa-0.16□□□□□ -2.44
snR39BsnR39B DSE1P40077 573 aa-0.16□□□□□ -2.44
snR39BsnR39B EPL1P43572 832 aa-0.16□□□□□ -2.44
snR39BsnR39B RPL37BP51402 88 aaKnown RBP-0.16□□□□□ -2.44
snR39BsnR39B UFD1P53044 361 aa-0.16□□□□□ -2.44
snR39BsnR39B TPC1P53257 314 aa-0.16□□□□□ -2.44
snR39BsnR39B COS6P53344 381 aa-0.16□□□□□ -2.44
snR39BsnR39B CTS2Q06350 511 aa-0.16□□□□□ -2.44
snR39BsnR39B TAF10Q12030 206 aa-0.16□□□□□ -2.44
snR39BsnR39B DET1Q99288 334 aaKnown RBP-0.16□□□□□ -2.44
snR39BsnR39B DPM1P14020 267 aaKnown RBP-0.17□□□□□ -2.44
snR39BsnR39B CLB3P24870 427 aa-0.17□□□□□ -2.44
snR39BsnR39B IMP2'P32351 346 aa-0.17□□□□□ -2.44
snR39BsnR39B NRP1P32770 719 aaKnown RBP RIP-Chip data-0.17□□□□□ -2.44not detected
snR39BsnR39B YSC83P32792 385 aa-0.17□□□□□ -2.44
snR39BsnR39B PCH2P38126 564 aa-0.17□□□□□ -2.44
snR39BsnR39B ZTA1P38230 334 aaKnown RBP-0.17□□□□□ -2.44
snR39BsnR39B SLM4P38247 162 aa-0.17□□□□□ -2.44
snR39BsnR39B IRC6P43615 237 aa-0.17□□□□□ -2.44
snR39BsnR39B RSM27P53305 110 aa-0.17□□□□□ -2.44
snR39BsnR39B TRM10Q12400 293 aa-0.17□□□□□ -2.44
snR39BsnR39B PFK27Q12471 397 aaPredicted RBP-0.17□□□□□ -2.44
snR39BsnR39B CBP2P03874 630 aaPredicted RBP-0.18□□□□□ -2.44
snR39BsnR39B SGA1P08019 549 aa-0.18□□□□□ -2.44
snR39BsnR39B YKL187CP34231 750 aa-0.18□□□□□ -2.44
snR39BsnR39B SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.18□□□□□ -2.44not detected
snR39BsnR39B MPE1P35728 441 aaKnown RBP-0.18□□□□□ -2.44
snR39BsnR39B MYO3P36006 1272 aa-0.18□□□□□ -2.44
snR39BsnR39B YKR045CP36138 183 aa-0.18□□□□□ -2.44
snR39BsnR39B GLE2P40066 365 aa-0.18□□□□□ -2.44
snR39BsnR39B RPL10P41805 221 aaKnown RBP-0.18□□□□□ -2.44
snR39BsnR39B MPS2P53159 387 aa-0.18□□□□□ -2.44
snR39BsnR39B BIO4P53630 237 aa-0.18□□□□□ -2.44
snR39BsnR39B SLM2P53955 656 aa-0.18□□□□□ -2.44
snR39BsnR39B CIK1Q01649 594 aa-0.18□□□□□ -2.44
snR39BsnR39B MDM1Q01846 1127 aa-0.18□□□□□ -2.44
snR39BsnR39B YLR456WQ06199 204 aa-0.18□□□□□ -2.44
snR39BsnR39B MIM1Q08176 113 aa-0.18□□□□□ -2.44
snR39BsnR39B PRR2Q12310 699 aa-0.18□□□□□ -2.44
snR39BsnR39B ERP3Q12403 225 aa-0.18□□□□□ -2.44
snR39BsnR39B YPL247CQ12523 523 aa-0.18□□□□□ -2.44
snR39BsnR39B UBA3Q99344 299 aa-0.18□□□□□ -2.44
snR39BsnR39B CDC7P06243 507 aa-0.19□□□□□ -2.44
snR39BsnR39B REC107P21651 314 aa-0.19□□□□□ -2.44
snR39BsnR39B DPB3P27344 201 aa-0.19□□□□□ -2.44
snR39BsnR39B RIM1P32445 135 aaKnown RBP-0.19□□□□□ -2.44
snR39BsnR39B YOR062CP36025 268 aa-0.19□□□□□ -2.44
snR39BsnR39B YHR182WP38870 785 aa-0.19□□□□□ -2.44
snR39BsnR39B MNL1P38888 796 aa-0.19□□□□□ -2.44
snR39BsnR39B EDC2P40023 145 aaPredicted RBP-0.19□□□□□ -2.44
snR39BsnR39B HUA1P40325 198 aa-0.19□□□□□ -2.44
snR39BsnR39B PEP8P40335 379 aa-0.19□□□□□ -2.44
snR39BsnR39B MRPL49P40858 161 aaPredicted RBP-0.19□□□□□ -2.44
snR39BsnR39B RPL37AP49166 88 aaKnown RBP-0.19□□□□□ -2.44
snR39BsnR39B MND1P53102 219 aa-0.19□□□□□ -2.44
snR39BsnR39B RTT102P53330 157 aa-0.19□□□□□ -2.44
snR39BsnR39B CAB4P53332 305 aa-0.19□□□□□ -2.44
snR39BsnR39B OSH6Q02201 448 aa-0.19□□□□□ -2.44
snR39BsnR39B SVL3Q03088 825 aaKnown RBP-0.19□□□□□ -2.44
snR39BsnR39B AIM36Q03798 255 aa-0.19□□□□□ -2.44
snR39BsnR39B GRH1Q04410 372 aaKnown RBP-0.19□□□□□ -2.44
snR39BsnR39B RPN6Q12377 434 aa-0.19□□□□□ -2.44
snR39BsnR39B UBR2Q07963 1872 aa-0.19□□□□□ -2.44
snR39BsnR39B ZWF1P11412 505 aaKnown RBP-0.2□□□□□ -2.44
snR39BsnR39B YCR102CP25608 368 aa-0.2□□□□□ -2.44
snR39BsnR39B YCR051WP25631 222 aa-0.2□□□□□ -2.44
snR39BsnR39B ATG15P25641 520 aa-0.2□□□□□ -2.44
snR39BsnR39B ERV1P27882 189 aa-0.2□□□□□ -2.44
snR39BsnR39B URA7P28274 579 aaKnown RBP-0.2□□□□□ -2.44
snR39BsnR39B YHL044WP38727 235 aa-0.2□□□□□ -2.44
snR39BsnR39B YHR177WP38867 453 aa-0.2□□□□□ -2.44
snR39BsnR39B UTP25P40498 721 aaKnown RBP-0.2□□□□□ -2.44
snR39BsnR39B PAC11P40960 533 aa-0.2□□□□□ -2.44
snR39BsnR39B SHS1Q07657 551 aa-0.2□□□□□ -2.44
snR39BsnR39B AAD15Q08361 143 aa-0.2□□□□□ -2.44
snR39BsnR39B AGC1Q12482 902 aa-0.2□□□□□ -2.44
snR39BsnR39B YRF1-4O13559 1382 aa-0.2□□□□□ -2.44
snR39BsnR39B VAM7P32912 316 aa-0.21□□□□□ -2.44
snR39BsnR39B YDR089WP38966 869 aa-0.21□□□□□ -2.44
snR39BsnR39B PES4P39684 611 aa-0.21□□□□□ -2.44
snR39BsnR39B NOC2P39744 710 aaKnown RBP-0.21□□□□□ -2.44
snR39BsnR39B YNL320WP42840 284 aa-0.21□□□□□ -2.44
snR39BsnR39B PMT4P46971 762 aa-0.21□□□□□ -2.44
snR39BsnR39B YGR266WP53326 701 aa-0.21□□□□□ -2.44
snR39BsnR39B ALG9P53868 555 aaKnown RBP-0.21□□□□□ -2.44
snR39BsnR39B BUR2Q05949 395 aa-0.21□□□□□ -2.44
snR39BsnR39B YOL019WQ08157 551 aa-0.21□□□□□ -2.44
snR39BsnR39B ISA2Q12425 185 aa-0.21□□□□□ -2.44
snR39BsnR39B AFI1Q99222 893 aa-0.21□□□□□ -2.44
snR39BsnR39B PHO91P27514 894 aa-0.22□□□□□ -2.44
snR39BsnR39B CDC13P32797 924 aaKnown RBP-0.22□□□□□ -2.44
snR39BsnR39B COY1P34237 679 aa-0.22□□□□□ -2.44
snR39BsnR39B YHL026CP38740 315 aa-0.22□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms