RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C COA1P40452 197 aa1.78□□□□□ -2.13
ATG11YPR049C QRI1P43123 477 aaKnown RBP1.78□□□□□ -2.13
ATG11YPR049C IRC6P43615 237 aa1.78□□□□□ -2.13
ATG11YPR049C CPR6P53691 371 aaKnown RBP1.78□□□□□ -2.13
ATG11YPR049C SOV1Q04748 898 aa1.78□□□□□ -2.13
ATG11YPR049C RAF1Q06891 181 aa1.78□□□□□ -2.13
ATG11YPR049C URA10P30402 227 aa1.77□□□□□ -2.13
ATG11YPR049C VMA11P32842 164 aa1.77□□□□□ -2.13
ATG11YPR049C SMC2P38989 1170 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C YEL068CP39977 110 aa1.77□□□□□ -2.13
ATG11YPR049C YER010CP40011 234 aa1.77□□□□□ -2.13
ATG11YPR049C TPA1P40032 644 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C YIL024CP40543 189 aa1.77□□□□□ -2.13
ATG11YPR049C YFL012WP43580 148 aa1.77□□□□□ -2.13
ATG11YPR049C SCW4P53334 386 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C MKC7P53379 596 aa1.77□□□□□ -2.13
ATG11YPR049C CRN1Q06440 651 aa1.77□□□□□ -2.13
ATG11YPR049C SWA2Q06677 668 aa1.77□□□□□ -2.13
ATG11YPR049C MCH4Q08268 501 aa1.77□□□□□ -2.13
ATG11YPR049C ESA1Q08649 445 aa1.77□□□□□ -2.13
ATG11YPR049C YPR011CQ12251 326 aa1.77□□□□□ -2.13
ATG11YPR049C CBP2P03874 630 aaPredicted RBP1.77□□□□□ -2.13
ATG11YPR049C GPI12P23797 304 aa1.77□□□□□ -2.13
ATG11YPR049C RAD57P25301 460 aa1.77□□□□□ -2.13
ATG11YPR049C GRE3P38715 327 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
ATG11YPR049C AYR1P40471 297 aa1.77□□□□□ -2.13
ATG11YPR049C RPL10P41805 221 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C GLR1P41921 483 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C GTO1P48239 356 aa1.77□□□□□ -2.13
ATG11YPR049C ATP22P50273 684 aaPredicted RBP1.77□□□□□ -2.13
ATG11YPR049C YGL235WP53071 178 aa1.77□□□□□ -2.13
ATG11YPR049C TPC1P53257 314 aa1.77□□□□□ -2.13
ATG11YPR049C GTR1Q00582 310 aa1.77□□□□□ -2.13
ATG11YPR049C TLG1Q03322 224 aa1.77□□□□□ -2.13
ATG11YPR049C APC4Q04601 652 aa1.77□□□□□ -2.13
ATG11YPR049C YTH1Q06102 208 aaPredicted RBP1.77□□□□□ -2.13
ATG11YPR049C GEP3Q08622 556 aa1.77□□□□□ -2.13
ATG11YPR049C ILV5P06168 395 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C RRP43P25359 394 aaPredicted RBP1.77□□□□□ -2.13
ATG11YPR049C DBF20P32328 564 aa1.77□□□□□ -2.13
ATG11YPR049C SAC6P32599 642 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C RPC37P36121 282 aa1.77□□□□□ -2.13
ATG11YPR049C YBR096WP38256 230 aa1.77□□□□□ -2.13
ATG11YPR049C YBR220CP38318 560 aa1.77□□□□□ -2.13
ATG11YPR049C YHR177WP38867 453 aa1.77□□□□□ -2.13
ATG11YPR049C YMR134WP40207 237 aa1.77□□□□□ -2.13
ATG11YPR049C AZF1P41696 914 aa1.77□□□□□ -2.13
ATG11YPR049C YML6P51998 286 aa1.77□□□□□ -2.13
ATG11YPR049C SEC13Q04491 297 aaKnown RBP1.77□□□□□ -2.13
ATG11YPR049C SRL2Q12020 392 aa1.77□□□□□ -2.13
ATG11YPR049C SPE4Q12455 300 aa1.77□□□□□ -2.13
ATG11YPR049C AAC1P04710 309 aa1.76□□□□□ -2.13
ATG11YPR049C OCA4P25366 362 aa1.76□□□□□ -2.13
ATG11YPR049C PTC6P25646 442 aa1.76□□□□□ -2.13
ATG11YPR049C YHR035WP38769 630 aa1.76□□□□□ -2.13
ATG11YPR049C YJR141WP47172 347 aaPredicted RBP1.76□□□□□ -2.13
ATG11YPR049C MSC1Q03104 513 aa1.76□□□□□ -2.13
ATG11YPR049C OPY2Q06810 360 aa1.76□□□□□ -2.13
ATG11YPR049C MCP1Q12106 302 aa1.76□□□□□ -2.13
ATG11YPR049C SIR3P06701 978 aa1.76□□□□□ -2.13
ATG11YPR049C SEC53P07283 254 aaKnown RBP1.76□□□□□ -2.13
ATG11YPR049C TFS1P14306 219 aa1.76□□□□□ -2.13
ATG11YPR049C ART10P18634 518 aaKnown RBP1.76□□□□□ -2.13
ATG11YPR049C HNM1P19807 563 aa1.76□□□□□ -2.13
ATG11YPR049C HSM3P38348 480 aa1.76□□□□□ -2.13
ATG11YPR049C IBD2P53892 351 aa1.76□□□□□ -2.13
ATG11YPR049C YDL180WQ12301 547 aa1.76□□□□□ -2.13
ATG11YPR049C RAD14P28519 371 aa1.75□□□□□ -2.13
ATG11YPR049C FRE2P36033 711 aa1.75□□□□□ -2.13
ATG11YPR049C FES1P38260 290 aa1.75□□□□□ -2.13
ATG11YPR049C NSG1P38837 291 aa1.75□□□□□ -2.13
ATG11YPR049C RCF2P53721 224 aa1.75□□□□□ -2.13
ATG11YPR049C VPS75P53853 264 aa1.75□□□□□ -2.13
ATG11YPR049C MTQ1P53944 314 aa1.75□□□□□ -2.13
ATG11YPR049C PRP3Q03338 469 aaPredicted RBP1.75□□□□□ -2.13
ATG11YPR049C YMR010WQ03687 405 aa1.75□□□□□ -2.13
ATG11YPR049C URC2Q04411 772 aa1.75□□□□□ -2.13
ATG11YPR049C YDR124WQ04608 324 aa1.75□□□□□ -2.13
ATG11YPR049C COQ11Q05892 277 aa1.75□□□□□ -2.13
ATG11YPR049C RTR2Q12378 196 aa1.75□□□□□ -2.13
ATG11YPR049C NOP58Q12499 511 aaKnown RBP1.75□□□□□ -2.13
ATG11YPR049C GPH1P06738 902 aaKnown RBP1.75□□□□□ -2.13
ATG11YPR049C PDX1P16451 410 aa1.75□□□□□ -2.13
ATG11YPR049C CKI1P20485 582 aa1.75□□□□□ -2.13
ATG11YPR049C SPT10P35208 640 aa1.75□□□□□ -2.13
ATG11YPR049C ARB1P40024 610 aaKnown RBP1.75□□□□□ -2.13
ATG11YPR049C IDP2P41939 412 aa1.75□□□□□ -2.13
ATG11YPR049C MRK1P50873 501 aa1.75□□□□□ -2.13
ATG11YPR049C CLD1P53264 445 aa1.75□□□□□ -2.13
ATG11YPR049C IDP3P53982 420 aaKnown RBP1.75□□□□□ -2.13
ATG11YPR049C SKO1Q02100 647 aa1.75□□□□□ -2.13
ATG11YPR049C IRC15Q02733 499 aa1.75□□□□□ -2.13
ATG11YPR049C VPS60Q03390 229 aa1.75□□□□□ -2.13
ATG11YPR049C DPB4Q04603 196 aaKnown RBP1.75□□□□□ -2.13
ATG11YPR049C YPR064WQ12492 139 aa1.75□□□□□ -2.13
ATG11YPR049C YER190C-BP0CX94 160 aa1.75□□□□□ -2.13
ATG11YPR049C YEL077W-AP0CX95 160 aa1.75□□□□□ -2.13
ATG11YPR049C YGR296C-BP0CX96 160 aa1.75□□□□□ -2.13
ATG11YPR049C YPL283W-BP0CX97 160 aa1.75□□□□□ -2.13
ATG11YPR049C YPR204C-AP0CX98 160 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms