RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C PXR1P53335 271 aaPredicted RBP2.64□□□□□ -1.99
CUP9YPL177C NRM1P53718 249 aa2.64□□□□□ -1.99
CUP9YPL177C API2Q04413 109 aa2.64□□□□□ -1.99
CUP9YPL177C BUR2Q05949 395 aa2.64□□□□□ -1.99
CUP9YPL177C STE23Q06010 1027 aa2.64□□□□□ -1.99
CUP9YPL177C YDR262WQ12331 272 aa2.64□□□□□ -1.99
CUP9YPL177C FLO11P08640 1367 aa2.63□□□□□ -1.99
CUP9YPL177C GAL3P13045 520 aa2.63□□□□□ -1.99
CUP9YPL177C YKL071WP36086 256 aa2.63□□□□□ -1.99
CUP9YPL177C DBP7P36120 742 aaKnown RBP2.63□□□□□ -1.99
CUP9YPL177C TAE1P38340 232 aa2.63□□□□□ -1.99
CUP9YPL177C YGR067CP53243 804 aa2.63□□□□□ -1.99
CUP9YPL177C IES4Q08561 116 aa2.63□□□□□ -1.99
CUP9YPL177C STE2D6VTK4 431 aa2.62□□□□□ -1.99
CUP9YPL177C RNR2P09938 399 aaKnown RBP2.62□□□□□ -1.99
CUP9YPL177C SPS100P13130 326 aa2.62□□□□□ -1.99
CUP9YPL177C VMA2P16140 517 aaKnown RBP2.62□□□□□ -1.99
CUP9YPL177C DCC1P25559 380 aa2.62□□□□□ -1.99
CUP9YPL177C YFR018CP43599 363 aa2.62□□□□□ -1.99
CUP9YPL177C TPC1P53257 314 aa2.62□□□□□ -1.99
CUP9YPL177C HCH1P53834 153 aa2.62□□□□□ -1.99
CUP9YPL177C SED5Q01590 340 aa2.62□□□□□ -1.99
CUP9YPL177C REP1P03871 373 aa2.61□□□□□ -1.99
CUP9YPL177C RPL18AP0CX49 186 aaKnown RBP2.61□□□□□ -1.99
CUP9YPL177C RPL18BP0CX50 186 aaKnown RBP2.61□□□□□ -1.99
CUP9YPL177C VMA5P31412 392 aaKnown RBP2.61□□□□□ -1.99
CUP9YPL177C SRB2P34162 210 aa2.61□□□□□ -1.99
CUP9YPL177C COQ5P49017 307 aa2.61□□□□□ -1.99
CUP9YPL177C TAF6P53040 516 aa2.61□□□□□ -1.99
CUP9YPL177C FAR10Q06001 478 aa2.61□□□□□ -1.99
CUP9YPL177C YDR018CQ12185 396 aa2.61□□□□□ -1.99
CUP9YPL177C MHP1P43638 1398 aa2.61□□□□□ -1.99
CUP9YPL177C AUS1Q08409 1394 aa2.61□□□□□ -1.99
CUP9YPL177C TIP20P33891 701 aa2.6□□□□□ -1.99
CUP9YPL177C AIM20P40451 204 aa2.6□□□□□ -1.99
CUP9YPL177C YGR168CP53293 376 aa2.6□□□□□ -1.99
CUP9YPL177C ABZ2Q03266 374 aa2.6□□□□□ -1.99
CUP9YPL177C RVB1Q03940 463 aaKnown RBP2.6□□□□□ -1.99
CUP9YPL177C RPN8Q08723 338 aaKnown RBP2.6□□□□□ -1.99
CUP9YPL177C RBK1P25332 333 aa2.59□□□□□ -1.99
CUP9YPL177C KRR1P25586 316 aaPredicted RBP2.59□□□□□ -1.99
CUP9YPL177C YPS1P32329 569 aa2.59□□□□□ -1.99
CUP9YPL177C CYM1P32898 989 aa2.59□□□□□ -1.99
CUP9YPL177C CBF5P33322 483 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99 RIP-Chip
CUP9YPL177C KTI12P34253 313 aaKnown RBP2.59□□□□□ -1.99
CUP9YPL177C POP2P39008 433 aa2.59□□□□□ -1.99
CUP9YPL177C HIT1P46973 164 aa2.59□□□□□ -1.99
CUP9YPL177C PRO2P54885 456 aaKnown RBP2.59□□□□□ -1.99
CUP9YPL177C INP1Q03694 420 aa2.59□□□□□ -1.99
CUP9YPL177C YMR244WQ04018 355 aa2.59□□□□□ -1.99
CUP9YPL177C REX3Q12090 404 aa2.59□□□□□ -1.99
CUP9YPL177C VPS63O13549 108 aa2.58□□□□□ -2
CUP9YPL177C FUS3P16892 353 aaKnown RBP2.58□□□□□ -2
CUP9YPL177C COX10P21592 462 aa2.58□□□□□ -2
CUP9YPL177C MEI5P32489 222 aa2.58□□□□□ -2
CUP9YPL177C SUR1P33300 382 aa2.58□□□□□ -2
CUP9YPL177C MRX8Q05473 314 aa2.58□□□□□ -2
CUP9YPL177C MIM1Q08176 113 aa2.58□□□□□ -2
CUP9YPL177C RDL2Q08742 149 aaKnown RBP2.58□□□□□ -2
CUP9YPL177C CCH1P50077 2039 aa2.58□□□□□ -2
CUP9YPL177C FAB1P34756 2278 aa2.57□□□□□ -2
CUP9YPL177C STF1P01098 86 aa2.57□□□□□ -2
CUP9YPL177C CDC37P06101 506 aaKnown RBP2.57□□□□□ -2
CUP9YPL177C CTA1P15202 515 aa2.57□□□□□ -2
CUP9YPL177C ITR2P30606 609 aa2.57□□□□□ -2
CUP9YPL177C ZIP1P31111 875 aa2.57□□□□□ -2
CUP9YPL177C YKL162CP36052 402 aa2.57□□□□□ -2
CUP9YPL177C RCK1P38622 512 aa2.57□□□□□ -2
CUP9YPL177C EFM1P38732 585 aa2.57□□□□□ -2
CUP9YPL177C END3P39013 349 aa2.57□□□□□ -2
CUP9YPL177C OSW5P40219 148 aa2.57□□□□□ -2
CUP9YPL177C FMP48P53233 369 aa2.57□□□□□ -2
CUP9YPL177C CAB5Q03941 241 aa2.57□□□□□ -2
CUP9YPL177C VPS20Q04272 221 aa2.57□□□□□ -2
CUP9YPL177C UTP15Q04305 513 aaKnown RBP2.57□□□□□ -2
CUP9YPL177C SLF1Q12034 447 aaKnown RBP2.57□□□□□ -2
CUP9YPL177C APC2Q12440 853 aa2.57□□□□□ -2
CUP9YPL177C ACB1P31787 87 aa2.56□□□□□ -2
CUP9YPL177C RAD23P32628 398 aaKnown RBP2.56□□□□□ -2
CUP9YPL177C BUD2P33314 1104 aa2.56□□□□□ -2
CUP9YPL177C ZRT3P34240 503 aa2.56□□□□□ -2
CUP9YPL177C RFT1P38206 574 aaPredicted RBP2.56□□□□□ -2
CUP9YPL177C PET8P38921 284 aa2.56□□□□□ -2
CUP9YPL177C SSO2P39926 295 aa2.56□□□□□ -2
CUP9YPL177C UFE1P41834 346 aa2.56□□□□□ -2
CUP9YPL177C HST4P53688 370 aa2.56□□□□□ -2
CUP9YPL177C YMR111CQ04461 462 aaPredicted RBP2.56□□□□□ -2
CUP9YPL177C MRX9Q07349 420 aaKnown RBP2.56□□□□□ -2
CUP9YPL177C YDL211CQ12121 372 aa2.56□□□□□ -2
CUP9YPL177C PAA1Q12447 191 aaKnown RBP2.56□□□□□ -2
CUP9YPL177C TPS2P31688 896 aaKnown RBP2.55□□□□□ -2
CUP9YPL177C FMT1P32785 401 aa2.55□□□□□ -2
CUP9YPL177C SKG6P32900 734 aaPredicted RBP2.55□□□□□ -2
CUP9YPL177C PRY2P36110 329 aa2.55□□□□□ -2
CUP9YPL177C FRM2P37261 193 aa2.55□□□□□ -2
CUP9YPL177C SWC5P38326 303 aa2.55□□□□□ -2
CUP9YPL177C BDH1P39714 382 aa2.55□□□□□ -2
CUP9YPL177C DSE1P40077 573 aa2.55□□□□□ -2
CUP9YPL177C RRG9P40156 214 aa2.55□□□□□ -2
CUP9YPL177C UTP25P40498 721 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms