RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W UTP25P40498 721 aaKnown RBP1.89□□□□□ -2.11
BRO1YPL084W RNH201P53942 307 aa1.89□□□□□ -2.11
BRO1YPL084W RPL21AQ02753 160 aaKnown RBP1.89□□□□□ -2.11
BRO1YPL084W ALE1Q08548 619 aa1.89□□□□□ -2.11
BRO1YPL084W PAA1Q12447 191 aaKnown RBP1.89□□□□□ -2.11
BRO1YPL084W SOD1P00445 154 aaKnown RBP1.88□□□□□ -2.11
BRO1YPL084W GCD2P12754 651 aaPredicted RBP1.88□□□□□ -2.11
BRO1YPL084W RBK1P25332 333 aa1.88□□□□□ -2.11
BRO1YPL084W MNN9P39107 395 aaKnown RBP1.88□□□□□ -2.11
BRO1YPL084W RIB4P50861 169 aaPredicted RBP1.88□□□□□ -2.11
BRO1YPL084W VEL1P53058 206 aa1.88□□□□□ -2.11
BRO1YPL084W YGR018CP53211 109 aa1.88□□□□□ -2.11
BRO1YPL084W TPS1Q00764 495 aaKnown RBP1.88□□□□□ -2.11
BRO1YPL084W MRX11Q03079 207 aa1.88□□□□□ -2.11
BRO1YPL084W SCS7Q03529 384 aa1.88□□□□□ -2.11
BRO1YPL084W SIN3P22579 1536 aa1.88□□□□□ -2.11
BRO1YPL084W ADH1P00330 348 aaKnown RBP1.88□□□□□ -2.11
BRO1YPL084W ASP3-2P0CX77 362 aa1.88□□□□□ -2.11
BRO1YPL084W ASP3-3P0CX78 362 aa1.88□□□□□ -2.11
BRO1YPL084W ASP3-4P0CX79 362 aa1.88□□□□□ -2.11
BRO1YPL084W ASP3-1P0CZ17 362 aa1.88□□□□□ -2.11
BRO1YPL084W ECT1P33412 323 aa1.88□□□□□ -2.11
BRO1YPL084W MRP21P38175 177 aa1.88□□□□□ -2.11
BRO1YPL084W SHE1P38200 338 aa1.88□□□□□ -2.11
BRO1YPL084W YMR111CQ04461 462 aaPredicted RBP1.88□□□□□ -2.11
BRO1YPL084W MCH1Q07376 486 aa1.88□□□□□ -2.11
BRO1YPL084W LDB17Q12342 491 aa1.88□□□□□ -2.11
BRO1YPL084W CBP6P07253 162 aaPredicted RBP1.87□□□□□ -2.11
BRO1YPL084W NOP1P15646 327 aaKnown RBP1.87□□□□□ -2.11
BRO1YPL084W ACB1P31787 87 aa1.87□□□□□ -2.11
BRO1YPL084W MEI5P32489 222 aa1.87□□□□□ -2.11
BRO1YPL084W YKL162CP36052 402 aa1.87□□□□□ -2.11
BRO1YPL084W YKL071WP36086 256 aa1.87□□□□□ -2.11
BRO1YPL084W SMP1P38128 452 aa1.87□□□□□ -2.11
BRO1YPL084W FET3P38993 636 aa1.87□□□□□ -2.11
BRO1YPL084W DBP6P53734 629 aaKnown RBP1.87□□□□□ -2.11
BRO1YPL084W SLF1Q12034 447 aaKnown RBP1.87□□□□□ -2.11
BRO1YPL084W YPR1Q12458 312 aa1.87□□□□□ -2.11
BRO1YPL084W REP1P03871 373 aa1.87□□□□□ -2.11
BRO1YPL084W SPS100P13130 326 aa1.87□□□□□ -2.11
BRO1YPL084W KTI12P34253 313 aaKnown RBP1.87□□□□□ -2.11
BRO1YPL084W DTR1P38125 572 aa1.87□□□□□ -2.11
BRO1YPL084W RRF1P38771 230 aa1.87□□□□□ -2.11
BRO1YPL084W SEO1P39709 593 aa1.87□□□□□ -2.11
BRO1YPL084W VOA1P53262 265 aa1.87□□□□□ -2.11
BRO1YPL084W NRM1P53718 249 aa1.87□□□□□ -2.11
BRO1YPL084W YPL080CQ02826 108 aa1.87□□□□□ -2.11
BRO1YPL084W ESC1Q03661 1658 aaKnown RBP1.87□□□□□ -2.11
BRO1YPL084W MET5P47169 1442 aa1.87□□□□□ -2.11
BRO1YPL084W CAR2P07991 424 aaKnown RBP1.86□□□□□ -2.11
BRO1YPL084W BGL2P15703 313 aaKnown RBP1.86□□□□□ -2.11
BRO1YPL084W CHL4P38907 458 aa1.86□□□□□ -2.11
BRO1YPL084W FHL1P39521 936 aa1.86□□□□□ -2.11
BRO1YPL084W PCL7P40186 285 aa1.86□□□□□ -2.11
BRO1YPL084W IRC4Q03036 179 aa1.86□□□□□ -2.11
BRO1YPL084W SAM4Q08985 325 aaKnown RBP1.86□□□□□ -2.11
BRO1YPL084W SSK2P53599 1579 aa1.86□□□□□ -2.11
BRO1YPL084W MHP1P43638 1398 aa1.86□□□□□ -2.11
BRO1YPL084W CTA1P15202 515 aa1.86□□□□□ -2.11
BRO1YPL084W RAD23P32628 398 aaKnown RBP1.86□□□□□ -2.11
BRO1YPL084W SHE3P38272 425 aaKnown RBP1.86□□□□□ -2.11
BRO1YPL084W INA22P40576 216 aa1.86□□□□□ -2.11
BRO1YPL084W VAC14Q06708 880 aa1.86□□□□□ -2.11
BRO1YPL084W PBP4Q07362 185 aaKnown RBP1.86□□□□□ -2.11
BRO1YPL084W PFK27Q12471 397 aaPredicted RBP1.86□□□□□ -2.11
BRO1YPL084W DCP1Q12517 231 aaPredicted RBP1.86□□□□□ -2.11
BRO1YPL084W BNI1P41832 1953 aa1.85□□□□□ -2.11
BRO1YPL084W SAR1P20606 190 aaKnown RBP1.85□□□□□ -2.11
BRO1YPL084W EPT1P22140 391 aa1.85□□□□□ -2.11
BRO1YPL084W SPS19P32573 292 aaKnown RBP1.85□□□□□ -2.11
BRO1YPL084W ZRT1P32804 376 aa1.85□□□□□ -2.11
BRO1YPL084W PNC1P53184 216 aaKnown RBP1.85□□□□□ -2.11
BRO1YPL084W VHS1Q03785 461 aa1.85□□□□□ -2.11
BRO1YPL084W FAR10Q06001 478 aa1.85□□□□□ -2.11
BRO1YPL084W RDL2Q08742 149 aaKnown RBP1.85□□□□□ -2.11
BRO1YPL084W MMT2Q08970 484 aa1.85□□□□□ -2.11
BRO1YPL084W MSS116P15424 664 aaKnown RBP1.85□□□□□ -2.11
BRO1YPL084W DBP3P20447 523 aaKnown RBP1.85□□□□□ -2.11
BRO1YPL084W MID2P36027 376 aa1.85□□□□□ -2.11
BRO1YPL084W MRPL40P36534 297 aa1.85□□□□□ -2.11
BRO1YPL084W TAE1P38340 232 aa1.85□□□□□ -2.11
BRO1YPL084W RRT13P40042 185 aa1.85□□□□□ -2.11
BRO1YPL084W DSE1P40077 573 aa1.85□□□□□ -2.11
BRO1YPL084W TPC1P53257 314 aa1.85□□□□□ -2.11
BRO1YPL084W ARP5P53946 755 aa1.85□□□□□ -2.11
BRO1YPL084W PUT4P15380 627 aa1.84□□□□□ -2.11
BRO1YPL084W ERD1P16151 362 aa1.84□□□□□ -2.11
BRO1YPL084W CBF5P33322 483 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
BRO1YPL084W ECM34P38728 170 aa1.84□□□□□ -2.11
BRO1YPL084W GGC1P38988 300 aa1.84□□□□□ -2.11
BRO1YPL084W YFL040WP43562 540 aa1.84□□□□□ -2.11
BRO1YPL084W HIT1P46973 164 aa1.84□□□□□ -2.11
BRO1YPL084W API2Q04413 109 aa1.84□□□□□ -2.11
BRO1YPL084W RRG8Q06109 277 aa1.84□□□□□ -2.11
BRO1YPL084W MRX9Q07349 420 aaKnown RBP1.84□□□□□ -2.11
BRO1YPL084W YLR012CQ07927 99 aa1.84□□□□□ -2.11
BRO1YPL084W RAX2Q12465 1220 aa1.84□□□□□ -2.11
BRO1YPL084W PRM4Q12498 284 aa1.84□□□□□ -2.11
BRO1YPL084W STE2D6VTK4 431 aa1.84□□□□□ -2.12
BRO1YPL084W DAL80P26343 269 aa1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms