RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	NAS6	P50086	228 aa		3.08	□□□□□ -1.92
RPN8	YOR261C	PRM1	P53835	661 aa		3.08	□□□□□ -1.92
RPN8	YOR261C	MRX8	Q05473	314 aa		3.08	□□□□□ -1.92
RPN8	YOR261C	PSY3	Q12318	242 aa		3.08	□□□□□ -1.92
RPN8	YOR261C	YLL053C	P0CD98	152 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	CIN8	P27895	1000 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	SWI3	P32591	825 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	TPC1	P53257	314 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	APC4	Q04601	652 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	YPR195C	Q06594	109 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	YPS3	Q12303	508 aa		3.07	□□□□□ -1.92
RPN8	YOR261C	YEL043W	P32618	956 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	AGA2	P32781	87 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	MYO3	P36006	1272 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	PRP39	P39682	629 aa	Known RBP	3.06	□□□□□ -1.92
RPN8	YOR261C	BTT1	P40314	149 aa	Predicted RBP	3.06	□□□□□ -1.92
RPN8	YOR261C	YIL089W	P40500	205 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	NAS2	P40555	220 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	YIR035C	P40579	254 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	ZRG17	P53735	605 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	INP2	Q03824	705 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	RRB1	Q04225	511 aa	Known RBP	3.06	□□□□□ -1.92
RPN8	YOR261C	SPH1	Q06160	661 aa		3.06	□□□□□ -1.92
RPN8	YOR261C	FLO11	P08640	1367 aa		3.05	□□□□□ -1.92
RPN8	YOR261C	CKA2	P19454	339 aa		3.05	□□□□□ -1.92
RPN8	YOR261C	VPH1	P32563	840 aa	Known RBP	3.05	□□□□□ -1.92
RPN8	YOR261C	SKG6	P32900	734 aa	Predicted RBP	3.05	□□□□□ -1.92
RPN8	YOR261C	RRG9	P40156	214 aa		3.05	□□□□□ -1.92
RPN8	YOR261C	CPR7	P47103	393 aa		3.05	□□□□□ -1.92
RPN8	YOR261C	NRM1	P53718	249 aa		3.05	□□□□□ -1.92
RPN8	YOR261C	PDR16	P53860	351 aa	Known RBP	3.05	□□□□□ -1.92
RPN8	YOR261C	RFM1	Q12192	310 aa		3.05	□□□□□ -1.92
RPN8	YOR261C	VPS63	O13549	108 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	REP1	P03871	373 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	IME2	P32581	645 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	BLI1	P35727	113 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	UIP5	P36137	443 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	SMF2	P38778	549 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	YDL211C	Q12121	372 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	SPO24	Q3E752	67 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	RGS2	Q99188	309 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	BI3	Q9ZZW7	517 aa		3.04	□□□□□ -1.92
RPN8	YOR261C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
RPN8	YOR261C	LIN1	P38852	340 aa	Predicted RBP	3.03	□□□□□ -1.92
RPN8	YOR261C	BDH1	P39714	382 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	COS4	P43542	379 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	YGL114W	P53134	725 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	INP1	Q03694	420 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	YMR244W	Q04018	355 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	UTP15	Q04305	513 aa	Known RBP	3.03	□□□□□ -1.92
RPN8	YOR261C	ECM19	Q06011	112 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	YDR262W	Q12331	272 aa		3.03	□□□□□ -1.92
RPN8	YOR261C	AST1	P35183	429 aa		3.02	□□□□□ -1.93
RPN8	YOR261C	FYV8	P46949	817 aa	Known RBP	3.02	□□□□□ -1.93
RPN8	YOR261C	TAF6	P53040	516 aa		3.02	□□□□□ -1.93
RPN8	YOR261C	PXR1	P53335	271 aa	Predicted RBP	3.02	□□□□□ -1.93
RPN8	YOR261C	HCH1	P53834	153 aa		3.02	□□□□□ -1.93
RPN8	YOR261C	YNL146W	P53906	100 aa		3.02	□□□□□ -1.93
RPN8	YOR261C	MHP1	P43638	1398 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	CTA1	P15202	515 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	RPB9	P27999	122 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	ZRT3	P34240	503 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	RCK1	P38622	512 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	PMT4	P46971	762 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	SDS23	P53172	527 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	DIB1	Q06819	143 aa	Predicted RBP	3.01	□□□□□ -1.93
RPN8	YOR261C	PRM4	Q12498	284 aa		3.01	□□□□□ -1.93
RPN8	YOR261C	DFM1	Q12743	341 aa	Known RBP	3.01	□□□□□ -1.93
RPN8	YOR261C	SMI1	P32566	505 aa		3	□□□□□ -1.93
RPN8	YOR261C	BUD2	P33314	1104 aa		3	□□□□□ -1.93
RPN8	YOR261C	YKL187C	P34231	750 aa		3	□□□□□ -1.93
RPN8	YOR261C	KTI12	P34253	313 aa	Known RBP	3	□□□□□ -1.93
RPN8	YOR261C	RFT1	P38206	574 aa	Predicted RBP	3	□□□□□ -1.93
RPN8	YOR261C	YMR262W	P38430	313 aa		3	□□□□□ -1.93
RPN8	YOR261C	FMP48	P53233	369 aa		3	□□□□□ -1.93
RPN8	YOR261C	SMD1	Q02260	146 aa	Predicted RBP	3	□□□□□ -1.93
RPN8	YOR261C	GMC1	Q04399	608 aa		3	□□□□□ -1.93
RPN8	YOR261C	MRX9	Q07349	420 aa	Known RBP	3	□□□□□ -1.93
RPN8	YOR261C	MIM1	Q08176	113 aa		3	□□□□□ -1.93
RPN8	YOR261C	APC2	Q12440	853 aa		3	□□□□□ -1.93
RPN8	YOR261C	CPT1	P17898	393 aa		2.99	□□□□□ -1.93
RPN8	YOR261C	VMA5	P31412	392 aa	Known RBP	2.99	□□□□□ -1.93
RPN8	YOR261C	SRB2	P34162	210 aa		2.99	□□□□□ -1.93
RPN8	YOR261C	DSE1	P40077	573 aa		2.99	□□□□□ -1.93
RPN8	YOR261C	MIC19	P43594	170 aa		2.99	□□□□□ -1.93
RPN8	YOR261C	RPN14	P53196	417 aa		2.99	□□□□□ -1.93
RPN8	YOR261C	VTI1	Q04338	217 aa		2.99	□□□□□ -1.93
RPN8	YOR261C	RDL2	Q08742	149 aa	Known RBP	2.99	□□□□□ -1.93
RPN8	YOR261C	RNR2	P09938	399 aa	Known RBP	2.98	□□□□□ -1.93
RPN8	YOR261C	SPS100	P13130	326 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	CUP2	P15315	225 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	RBK1	P25332	333 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	ACB1	P31787	87 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	HIT1	P46973	164 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	SHE4	P51534	789 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	YGR016W	P53209	190 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	YDR286C	Q05530	114 aa		2.98	□□□□□ -1.93
RPN8	YOR261C	CAJ1	P39101	391 aa		2.97	□□□□□ -1.93
RPN8	YOR261C	SPO73	P40031	143 aa		2.97	□□□□□ -1.93
RPN8	YOR261C	STE23	Q06010	1027 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms