RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C MPH1P40562 993 aa7.36□□□□□ -1.23
PUP1YOR157C TWF1P53250 332 aa7.36□□□□□ -1.23
PUP1YOR157C SYF2P53277 215 aaPredicted RBP7.36□□□□□ -1.23
PUP1YOR157C UIP4Q08926 304 aa7.36□□□□□ -1.23
PUP1YOR157C YPR071WQ12346 211 aa7.36□□□□□ -1.23
PUP1YOR157C HMS1Q12398 434 aa7.36□□□□□ -1.23
PUP1YOR157C YCL048W-AQ2V2Q2 79 aa7.36□□□□□ -1.23
PUP1YOR157C MF(ALPHA)1P01149 165 aa7.35□□□□□ -1.23
PUP1YOR157C PEP4P07267 405 aaKnown RBP7.35□□□□□ -1.23
PUP1YOR157C THI4P32318 326 aa7.35□□□□□ -1.23
PUP1YOR157C HCS1P34243 683 aa7.35□□□□□ -1.23
PUP1YOR157C YBR138CP38277 524 aa7.35□□□□□ -1.23
PUP1YOR157C RCK1P38622 512 aa7.35□□□□□ -1.23
PUP1YOR157C RLP7P40693 322 aaKnown RBP7.35□□□□□ -1.23
PUP1YOR157C NIT3P49954 291 aa7.35□□□□□ -1.23
PUP1YOR157C BRR6P53062 197 aa7.35□□□□□ -1.23
PUP1YOR157C ARC35P53731 342 aaKnown RBP7.35□□□□□ -1.23
PUP1YOR157C YPK2P18961 677 aa7.34□□□□□ -1.23
PUP1YOR157C SED4P25365 1065 aa7.34□□□□□ -1.23
PUP1YOR157C YHR097CP38809 366 aaKnown RBP7.34□□□□□ -1.23
PUP1YOR157C NAB3P38996 802 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
PUP1YOR157C YFL066CP43538 392 aa7.34□□□□□ -1.23
PUP1YOR157C DPB11P47027 764 aaPredicted RBP7.34□□□□□ -1.23
PUP1YOR157C PPT1P53043 513 aa7.34□□□□□ -1.23
PUP1YOR157C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
PUP1YOR157C VPS60Q03390 229 aa7.34□□□□□ -1.23
PUP1YOR157C RVB1Q03940 463 aaKnown RBP7.34□□□□□ -1.23
PUP1YOR157C KRE28Q04431 385 aa7.34□□□□□ -1.23
PUP1YOR157C TPO3Q06451 622 aa7.34□□□□□ -1.23
PUP1YOR157C SSK1Q07084 712 aa7.34□□□□□ -1.23
PUP1YOR157C RIB2Q12362 591 aaKnown RBP7.34□□□□□ -1.23
PUP1YOR157C TY1A-DR4O74302 440 aa7.33□□□□□ -1.24
PUP1YOR157C ARG3P05150 338 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-HP0C2I4 478 aaKnown RBP7.33□□□□□ -1.24
PUP1YOR157C TY1A-AP0CX57 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-PR1P0CX58 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-ORP0CX59 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-PR2P0CX60 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-DR5P0CX65 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-ER2P0CX66 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-GR3P0CX67 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-LR1P0CX68 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-MR2P0CX69 440 aa7.33□□□□□ -1.24
PUP1YOR157C CCA1P21269 546 aa7.33□□□□□ -1.24
PUP1YOR157C TIM12P32830 109 aa7.33□□□□□ -1.24
PUP1YOR157C LNP1P38878 278 aa7.33□□□□□ -1.24
PUP1YOR157C ISC1P40015 477 aaKnown RBP7.33□□□□□ -1.24
PUP1YOR157C TY1A-JR2P47099 440 aa7.33□□□□□ -1.24
PUP1YOR157C MRM2P53123 320 aa7.33□□□□□ -1.24
PUP1YOR157C RBG2P53295 368 aaKnown RBP7.33□□□□□ -1.24
PUP1YOR157C TY1A-DR1Q03856 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-ML1Q04706 440 aaKnown RBP7.33□□□□□ -1.24
PUP1YOR157C YMR317WQ04893 1140 aa7.33□□□□□ -1.24
PUP1YOR157C FAR8Q05040 523 aa7.33□□□□□ -1.24
PUP1YOR157C YPL191CQ08930 360 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-BRQ12217 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-NL2Q12470 440 aa7.33□□□□□ -1.24
PUP1YOR157C TY1A-GR2Q12485 440 aa7.33□□□□□ -1.24
PUP1YOR157C NOT5Q12514 560 aaPredicted RBP7.33□□□□□ -1.24
PUP1YOR157C YBL113CQ7M4S9 792 aa7.33□□□□□ -1.24
PUP1YOR157C SAC1P32368 623 aaKnown RBP7.32□□□□□ -1.24
PUP1YOR157C MET28P40573 187 aa7.32□□□□□ -1.24
PUP1YOR157C COS1P53822 381 aa7.32□□□□□ -1.24
PUP1YOR157C YNL181WP53878 407 aa7.32□□□□□ -1.24
PUP1YOR157C YNL046WP53956 172 aa7.32□□□□□ -1.24
PUP1YOR157C AGE1Q04412 482 aa7.32□□□□□ -1.24
PUP1YOR157C CTS2Q06350 511 aa7.32□□□□□ -1.24
PUP1YOR157C COQ10Q08058 207 aa7.32□□□□□ -1.24
PUP1YOR157C DBP3P20447 523 aaKnown RBP7.31□□□□□ -1.24
PUP1YOR157C PHO91P27514 894 aa7.31□□□□□ -1.24
PUP1YOR157C CAM1P29547 415 aaKnown RBP7.31□□□□□ -1.24
PUP1YOR157C DAL3P32459 195 aa7.31□□□□□ -1.24
PUP1YOR157C CTR2P38865 189 aa7.31□□□□□ -1.24
PUP1YOR157C MNN9P39107 395 aaKnown RBP7.31□□□□□ -1.24
PUP1YOR157C GMC1Q04399 608 aa7.31□□□□□ -1.24
PUP1YOR157C TAZ1Q06510 381 aa7.31□□□□□ -1.24
PUP1YOR157C IZH2Q12442 317 aa7.31□□□□□ -1.24
PUP1YOR157C AGE2P40529 298 aa7.3□□□□□ -1.24
PUP1YOR157C NAS2P40555 220 aa7.3□□□□□ -1.24
PUP1YOR157C IRC7P43623 340 aa7.3□□□□□ -1.24
PUP1YOR157C TNA1P53322 534 aa7.3□□□□□ -1.24
PUP1YOR157C MPP6P53725 186 aaPredicted RBP7.3□□□□□ -1.24
PUP1YOR157C SUI3P09064 285 aaKnown RBP7.29□□□□□ -1.24
PUP1YOR157C TOP3P13099 656 aa7.29□□□□□ -1.24
PUP1YOR157C HNM1P19807 563 aa7.29□□□□□ -1.24
PUP1YOR157C CLG1P35190 452 aa7.29□□□□□ -1.24
PUP1YOR157C GPX1P36014 167 aa7.29□□□□□ -1.24
PUP1YOR157C PIC2P40035 300 aa7.29□□□□□ -1.24
PUP1YOR157C GZF3P42944 551 aaKnown RBP7.29□□□□□ -1.24
PUP1YOR157C YDL186WP48568 277 aa7.29□□□□□ -1.24
PUP1YOR157C TRS65P32893 560 aa7.28□□□□□ -1.24
PUP1YOR157C YNR062CP53748 327 aa7.28□□□□□ -1.24
PUP1YOR157C YNL165WP53891 406 aa7.28□□□□□ -1.24
PUP1YOR157C MMT1Q03218 510 aa7.28□□□□□ -1.24
PUP1YOR157C PRP3Q03338 469 aaPredicted RBP7.28□□□□□ -1.24
PUP1YOR157C SPO77Q06134 477 aa7.28□□□□□ -1.24
PUP1YOR157C SYO1Q07395 620 aa7.28□□□□□ -1.24
PUP1YOR157C HRT1Q08273 121 aa7.28□□□□□ -1.24
PUP1YOR157C RPL39P04650 51 aa7.27□□□□□ -1.25
PUP1YOR157C URE2P23202 354 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms