RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C VMA22P38784 181 aa2.38□□□□□ -2.03
DNL4YOR005C CHS7P38843 316 aa2.38□□□□□ -2.03
DNL4YOR005C RCY1P39531 840 aa2.38□□□□□ -2.03
DNL4YOR005C SEO1P39709 593 aa2.38□□□□□ -2.03
DNL4YOR005C YEL020CP39994 560 aa2.38□□□□□ -2.03
DNL4YOR005C PEP8P40335 379 aa2.38□□□□□ -2.03
DNL4YOR005C FIS1P40515 155 aa2.38□□□□□ -2.03
DNL4YOR005C STE24P47154 453 aa2.38□□□□□ -2.03
DNL4YOR005C BIO3P50277 480 aa2.38□□□□□ -2.03
DNL4YOR005C TIM44Q01852 431 aa2.38□□□□□ -2.03
DNL4YOR005C YPR172WQ06608 200 aa2.38□□□□□ -2.03
DNL4YOR005C ASA1Q06822 443 aa2.38□□□□□ -2.03
DNL4YOR005C SKI7Q08491 747 aaPredicted RBP2.38□□□□□ -2.03
DNL4YOR005C PFA4Q12006 378 aa2.38□□□□□ -2.03
DNL4YOR005C NSL1Q12143 216 aa2.38□□□□□ -2.03
DNL4YOR005C YOR342CQ12182 319 aa2.38□□□□□ -2.03
DNL4YOR005C GIS3Q12418 502 aa2.38□□□□□ -2.03
DNL4YOR005C AI5_BETAQ9ZZX0 354 aa2.38□□□□□ -2.03
DNL4YOR005C MAS2P11914 482 aa2.38□□□□□ -2.03
DNL4YOR005C DAL2P25335 343 aa2.38□□□□□ -2.03
DNL4YOR005C SKN1P33336 771 aa2.38□□□□□ -2.03
DNL4YOR005C MRX3P38172 270 aa2.38□□□□□ -2.03
DNL4YOR005C TAE1P38340 232 aa2.38□□□□□ -2.03
DNL4YOR005C YHB1P39676 399 aaKnown RBP2.38□□□□□ -2.03
DNL4YOR005C PAC2P39937 518 aa2.38□□□□□ -2.03
DNL4YOR005C AST2P39945 430 aaKnown RBP2.38□□□□□ -2.03
DNL4YOR005C THO1P40040 218 aaKnown RBP2.38□□□□□ -2.03
DNL4YOR005C YJL070CP40361 888 aa2.38□□□□□ -2.03
DNL4YOR005C CPR7P47103 393 aa2.38□□□□□ -2.03
DNL4YOR005C TOS2P50078 622 aa2.38□□□□□ -2.03
DNL4YOR005C RMR1P53060 241 aa2.38□□□□□ -2.03
DNL4YOR005C PCP1P53259 346 aa2.38□□□□□ -2.03
DNL4YOR005C NOP19P53317 196 aaPredicted RBP2.38□□□□□ -2.03
DNL4YOR005C SUN4P53616 420 aa2.38□□□□□ -2.03
DNL4YOR005C YNL260CP53846 198 aa2.38□□□□□ -2.03
DNL4YOR005C ARK1P53974 638 aa2.38□□□□□ -2.03
DNL4YOR005C YPL068CQ02749 293 aa2.38□□□□□ -2.03
DNL4YOR005C SKI8Q02793 397 aaPredicted RBP2.38□□□□□ -2.03
DNL4YOR005C DYN3Q04949 312 aa2.38□□□□□ -2.03
DNL4YOR005C ATG38Q05789 226 aaKnown RBP2.38□□□□□ -2.03
DNL4YOR005C BNA5Q05979 453 aa2.38□□□□□ -2.03
DNL4YOR005C GMC2Q06201 188 aa2.38□□□□□ -2.03
DNL4YOR005C MED4Q12343 284 aa2.38□□□□□ -2.03
DNL4YOR005C BBP1Q12365 385 aa2.38□□□□□ -2.03
DNL4YOR005C ORT1Q12375 292 aa2.38□□□□□ -2.03
DNL4YOR005C RGS2Q99188 309 aa2.38□□□□□ -2.03
DNL4YOR005C BI3Q9ZZW7 517 aa2.38□□□□□ -2.03
DNL4YOR005C RPN13O13563 156 aa2.37□□□□□ -2.03
DNL4YOR005C ATP6P00854 259 aa2.37□□□□□ -2.03
DNL4YOR005C TEF1P02994 458 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C BCY1P07278 416 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C YLL053CP0CD98 152 aa2.37□□□□□ -2.03
DNL4YOR005C GCY1P14065 312 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
DNL4YOR005C NMT1P14743 455 aa2.37□□□□□ -2.03
DNL4YOR005C PHA2P32452 334 aa2.37□□□□□ -2.03
DNL4YOR005C TMT1P32643 299 aa2.37□□□□□ -2.03
DNL4YOR005C ECT1P33412 323 aa2.37□□□□□ -2.03
DNL4YOR005C AVT6P40074 448 aa2.37□□□□□ -2.03
DNL4YOR005C YRB2P40517 327 aa2.37□□□□□ -2.03
DNL4YOR005C SCD6P45978 349 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03 RIP-Chip
DNL4YOR005C CUS2P53830 285 aaPredicted RBP2.37□□□□□ -2.03
DNL4YOR005C YNL134CP53912 376 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C IMP4P53941 290 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C CTL1Q03220 320 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C RRP17Q04031 235 aaPredicted RBP2.37□□□□□ -2.03
DNL4YOR005C TPO3Q06451 622 aa2.37□□□□□ -2.03
DNL4YOR005C YOL107WQ12239 342 aa2.37□□□□□ -2.03
DNL4YOR005C ARP6Q12509 438 aa2.37□□□□□ -2.03
DNL4YOR005C RRP12Q12754 1228 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C MED11Q99278 115 aa2.37□□□□□ -2.03
DNL4YOR005C TPK3P05986 398 aa2.37□□□□□ -2.03
DNL4YOR005C GDH1P07262 454 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C ARF1P11076 181 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C SLM5P25345 492 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C URA10P30402 227 aa2.37□□□□□ -2.03
DNL4YOR005C VPS21P36017 210 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C FMP23P38231 175 aa2.37□□□□□ -2.03
DNL4YOR005C SLX1P38324 304 aa2.37□□□□□ -2.03
DNL4YOR005C PHO89P38361 574 aa2.37□□□□□ -2.03
DNL4YOR005C SBE22P38814 852 aa2.37□□□□□ -2.03
DNL4YOR005C CYC2P38909 366 aa2.37□□□□□ -2.03
DNL4YOR005C FET3P38993 636 aa2.37□□□□□ -2.03
DNL4YOR005C LYS12P40495 371 aaKnown RBP2.37□□□□□ -2.03
DNL4YOR005C SNZ3P43545 298 aa2.37□□□□□ -2.03
DNL4YOR005C HMS2P47175 358 aa2.37□□□□□ -2.03
DNL4YOR005C TIM21P53220 239 aa2.37□□□□□ -2.03
DNL4YOR005C GND2P53319 492 aa2.37□□□□□ -2.03
DNL4YOR005C SNZ2P53824 298 aa2.37□□□□□ -2.03
DNL4YOR005C YET2Q04210 160 aa2.37□□□□□ -2.03
DNL4YOR005C YMR034CQ05131 434 aaPredicted RBP2.37□□□□□ -2.03
DNL4YOR005C LDS2Q08218 356 aa2.37□□□□□ -2.03
DNL4YOR005C REX4Q08237 289 aa2.37□□□□□ -2.03
DNL4YOR005C DNL4Q08387 944 aaPredicted RBP2.37□□□□□ -2.03
DNL4YOR005C MUM3Q08750 479 aa2.37□□□□□ -2.03
DNL4YOR005C GAL4P04386 881 aa2.36□□□□□ -2.03
DNL4YOR005C CDC42P19073 191 aa2.36□□□□□ -2.03
DNL4YOR005C CIN8P27895 1000 aa2.36□□□□□ -2.03
DNL4YOR005C MEI4P29467 408 aa2.36□□□□□ -2.03
DNL4YOR005C CYM1P32898 989 aa2.36□□□□□ -2.03
DNL4YOR005C GDH2P33327 1092 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms